Peter, > I have have hit a snag installing netCDFPerl that I can't seem to find > my way around it. Everything seems OK up to the 'make' stage. > > I get a some messages that I don't know about. > > Executing 'make' produces > " Please specify prototyping behavior for NetCDF.xs (see perlxs manual)" The "prototyping behavior" message can be safely ignored. > Executing 'make test' produces' > "Can't load 'blib/arch/auto/NetCDF/NetCDF.so' for module NetCDF: > blib/arch/auto/NetCDF/Net > CDF.so: undefined symbol: H5Dclose at /usr/lib/perl/5.10/DynaLoader.pm line > 196. > at test.pl line 5 > Compilation failed in require at test.pl line 5. > BEGIN failed--compilation aborted at test.pl line 5. > make: *** [test_dynamic] Error 9 > make: *** [perl/test] Error 1 > make: *** [test] Error 2" Hmm... I don't recall ever seeing the "H5Dclose" error. I suspect that the netCDFPerl module is unable to locate the shareable HDF5 library when the "test.pl" script is run. Can you set an environment variable (e.g., "LD_LIBRARY_PATH") so that it contains the pathname of the HDF5 library (/usr/local/HDF5/lib) and retry the "make test"? > I am enclosing the the diagnostics you suggest. > > A. uname -a > Linux magpie 2.6.28-15-generic #52-Ubuntu SMP Wed Sep 9 10:49:34 UTC 2009 i686 > GNU/Linux > > B. cat VERSION > 1.2.4 > > C. which cc > /usr/bin/cc > > E. The config.log file ( attached) > F. The file "makefile.log". ( attached) > G. The file "make.log".( attached) > H. The file "test.log". (attached) > I. The file "install.log". ( not attempted yet.) > > I would be grateful for any help. > > Peter > > -- > /* > address@hidden > CSIRO Land & Water > GPO Box 1666 > Canberra ACT 2601 > ph 02 6246 5799 > fx 02 6246 5988 > mb 04 0633 3052 > */ Regards, Steve Emmerson Ticket Details =================== Ticket ID: RAH-648927 Department: Support netCDF Perl Priority: Normal Status: Closed
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