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[netCDF #AUL-358920]: Problem running "make check" netcdf-fortran-4.4.4.tar

Hello,

So I notice a couple of issues.  First, it appears that you have multiple 
versions of libnetcdf installed on your system.  This may cause some conflicts, 
and if you're able to resolve it and preserve only the latest version, that 
would be preferable.  Second, netCDF-Fortran 4.4.4 requires a later version of 
libnetcdf than 4.3.3, unfortunately.  The error you're seeing is a bug that was 
documented and fixed in subsequent releases.  I would try downloading and 
installing the latest libnetcdf version, 4.7.4, from 
https://github.com/Unidata/netcdf-c/releases, and try with that.

Thank you, have a great day,

-Ward

> Full Name: Franklyn  Ngundam
> Email Address: address@hidden
> Organization: NOAA
> Package Version: netcdf-4.3.3.tar.gz
> Operating System: RHEL 2.6.32-754.25.1.el6.x86_64
> Hardware:
> Description of problem: Good morning Sir/Madame,
> 
> I am encountering some issues install netcdf fortran. I have already 
> installed netcdf c successfully but I am having issues when configure 
> netcdf-fortran. These are the packages I am using.
> netcdf-fortran-4.4.4.tar
> netcdf-4.3.3.tar.gz
> 
> I only get an error when running "make check" under netcdf-fortran-4.4.4
> 
> Error is as follows
> /usr/bin/ld: warning: libnetcdf.so.6, needed by 
> /cpc/home/jieshun.zhu/tool/netcdf_insncdf/lib/libnetcdf.so, may conflict with 
> libnetcdf.so.7
> ../fortran/.libs/libnetcdff.so: undefined reference to `nc_open_mem'
> collect2: ld returned 1 exit status
> make[2]: *** [nf_test] Error 1
> make[2]: Leaving directory 
> `/cpc/home/jieshun.zhu/tool/netcdf_src/netcdf-fortran-4.4.4/nf_test'
> make[1]: *** [check-am] Error 2
> make[1]: Leaving directory 
> `/cpc/home/jieshun.zhu/tool/netcdf_src/netcdf-fortran-4.4.4/nf_test'
> make: *** [check-recursive] Error 1
> 
> 
> I have also attached config.log
> 
> These are the variables I used
> 
> export NCDIR=/cpc/home/jieshun.zhu/tool/netcdf_insncdf
> export NFDIR=/cpc/home/jieshun.zhu/tool/netcdf_insncdf
> export CPPFLAGS=" -I/cpc/home/jieshun.zhu/tool/netcdf_insncdf/include"
> export LDFLAGS=" -L/cpc/home/jieshun.zhu/tool/netcdf_insncdf/lib"
> export 
> LD_LIBRARY_PATH=$LD_LIBARY_PATH:/cpc/home/jieshun.zhu/tool/netcdf_insncdf/lib
> export LIBS=$LIBS" -lnetcdf"
> 
> I am also seeing these lines in config.log
> 
> ACLOCAL='${SHELL} 
> /cpc/home/jieshun.zhu/tool/netcdf_src/netcdf-fortran-4.4.4/missing 
> aclocal-1.14'
> AUTOCONF='${SHELL} 
> /cpc/home/jieshun.zhu/tool/netcdf_src/netcdf-fortran-4.4.4/missing autoconf'
> AUTOHEADER='${SHELL} 
> /cpc/home/jieshun.zhu/tool/netcdf_src/netcdf-fortran-4.4.4/missing autoheader'
> AUTOMAKE='${SHELL} 
> /cpc/home/jieshun.zhu/tool/netcdf_src/netcdf-fortran-4.4.4/missing 
> automake-1.14'
> MAKEINFO='${SHELL} 
> /cpc/home/jieshun.zhu/tool/netcdf_src/netcdf-fortran-4.4.4/missing makeinfo'
> 
> bnetcdf.so.7
> /usr/bin/ld: warning: libnetcdf.so.6, needed by 
> /cpc/home/jieshun.zhu/tool/netcdf_insncdf/lib/libnetcdf.so, may conflict with 
> libnetcdf.so.7
> /usr/bin/ld: warning: libnetcdf.so.6, needed by 
> /cpc/home/jieshun.zhu/tool/netcdf_insncdf/lib/libnetcdf.so, may conflict with 
> libnetcdf.so.7
> /usr/bin/ld: warning: libnetcdf.so.6, needed by 
> /cpc/home/jieshun.zhu/tool/netcdf_insncdf/lib/libnetcdf.so, may conflict with 
> libnetcdf.so.7
> /usr/bin/ld: warning: libnetcdf.so.6, needed by 
> /cpc/home/jieshun.zhu/tool/netcdf_insncdf/lib/libnetcdf.so, may conflict with 
> libnetcdf.so.7
> /usr/bin/ld: warning: libnetcdf.so.6, needed by 
> /cpc/home/jieshun.zhu/tool/netcdf_insncdf/lib/libnetcdf.so, may conflict with 
> libnetcdf.so.7
> 
> 
> Please can you point me to the right direction?
> 
> Thanks
> 
> Franklyn
> 
> 
> 
> 


Ticket Details
===================
Ticket ID: AUL-358920
Department: Support netCDF
Priority: Normal
Status: Closed
===================
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