Hello, From the `config.log` file you attached, I find the following: configure:3941: checking whether the C compiler works configure:3963: gcc -I/include -I/include -I/include -L/lib -L/lib -L/lib conftest.c -lnetcdf -lhdf5_hl -lhdf5 -lz >&5 /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: cannot find -lnetcdf /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: cannot find -lhdf5_hl /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: cannot find -lhdf5 /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: skipping incompatible /lib/libgcc_s.so.1 when searching for libgcc_s.so.1 /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: skipping incompatible /lib/libgcc_s.so.1 when searching for libgcc_s.so.1 /usr/lib64/gcc/x86_64-suse-linux/7/../../../../x86_64-suse-linux/bin/ld: skipping incompatible /lib/libgcc_s.so.1 when searching for libgcc_s.so.1 collect2: error: ld returned 1 exit status This suggests that there is a mismatch of some sort between the gcc you are using to compile vs the gcc runtime library (libgcc_s.so.1) found on the system LD_LIBRARY_PATH. Unfortunately I do not know enough about your environment to provide specific steps to resolve this issue, but hopefully it is a good starting place. There is likely a way to activate a particular development environment, and will likely need to be consistent with the development environment used to compile hdf5 and netcdf. If you're uncertain how to find the details for this specific machine, you might send an email to the appropriate support personnel. I'm sorry I can't provide more immediately actionable help, but hopefully this will get you started in the right direction! Have a great day, -Ward > Hi > > I'm using the nvhpc compiler to install netcdf on NERSC perlmutter. The > version is > > nvidia/21.9 > > It failed upon me at configuration. Would you please take a look? The > "config.log" is attached. > > Thanks, > > -- Jin > > Ticket Details =================== Ticket ID: BHW-384465 Department: Support netCDF Priority: Normal Status: Closed =================== NOTE: All email exchanges with Unidata User Support are recorded in the Unidata inquiry tracking system and then made publicly available through the web. If you do not want to have your interactions made available in this way, you must let us know in each email you send to us.
NOTE: All email exchanges with Unidata User Support are recorded in the Unidata inquiry tracking system and then made publicly available through the web. If you do not want to have your interactions made available in this way, you must let us know in each email you send to us.