[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

[netCDF #AIQ-845519]: Ask about parallel hdf5



Hello,

I've reviewed the config.log file you provided, but it is not immediately 
obvious why the `configure` script fails.  I'm afraid I'll have to refer you to 
support for the HDF group, found here: 
https://portal.hdfgroup.org/display/support.  Hopefully they will be able to 
help guide you in installing their software.

Thank you, have a good day,

-Ward

> Dear scientist?
> I'm one of the users of Netcdf4.4 and hdf5. I want to install hdf5-1.8.20 
> compiling by mpicc. First, I installed mpich-3.2.1 using gcc-8.3.0 
> (./configure --prefix=/home/shenhf/majun/setup-mpich-3.2.1 
> --disable-fortran), and make sure it work successfully. Next, I change the 
> bashrc file as follows:
> export CC=mpicc
> export CXX=mpicxx
> export FC=mpif90
> export F77=mpif90
> 
> Then:
> (1)export CPPFLAGS="-fPIC -I/home/shenhf/majun/setup/mpich-3.2.1/include"
> 
> (2)export LDFLAGS="-L/home/shenhf/majun/setup/mpich-3.2.1/lib"
> 
> (3)./configure --prefix=/home/shenhf/majun/setup/hdf5-1.8.20 
> --with-zlib=/usr/local/zlib --enable-fortran --enable-fortran2003 
> -enable-parallel --with-pic
> 
> >> checking for Fortran flag to compile .f90 files... unknown
> configure: error: Fortran could not compile .f90 files
> 
> Then I use: ./configure --prefix=/home/shenhf/majun/setup/hdf5-1.8.20 
> --with-zlib=/usr/local/zlib --enable-fortran --enable-fortran2003 
> -enable-parallel --with-pic FC=gfortran
> >>checking whether a simple MPI-IO C program can be linked... yes
> checking whether a simple MPI-IO Fortran program can be linked... no
> configure: error: unable to link a simple MPI-IO Fortran program
> 
> The config.log is attached below. I don't know what's wrong and beg for your 
> suggestion, any help or suggestion will be highly appreciated.
> 
> 
> ------------------------------
> --
> Thanks for your attention...
> --
> Best Regards,
> 
> ??
> SENDIMAGE??????????????
> ?????????129?, 430079
> Email: address@hidden/address@hidden
> Jun Ma, PHD Candidate
> School of Resource and Environmental Sciences,
> Wuhan University, Wuhan 430079, China


Ticket Details
===================
Ticket ID: AIQ-845519
Department: Support netCDF
Priority: Normal
Status: Closed
===================
NOTE: All email exchanges with Unidata User Support are recorded in the Unidata 
inquiry tracking system and then made publicly available through the web.  If 
you do not want to have your interactions made available in this way, you must 
let us know in each email you send to us.