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[netCDF #RGA-191101]: failed attempt to cimpile netcdf-fortran



Hello Luiz,

The email we received contained a lot of blank space; what was included after 
the blank space had lost its formatting.  Can you provide the config.log file 
as an attachment? That will make it easier for me to figure out what is going 
on.

Thank you, have a great day,

-Ward

> Hi, i've been trying to compile netcdf-fortran but i'm having trouble doing
> it.
> 
> here is the complete config.log
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> *This file contains any messages produced by compilers whilerunning
> configure, to aid debugging if configure makes a mistake.It was created by
> netCDF-Fortran configure 4.4.4, which wasgenerated by GNU Autoconf 2.69.
> Invocation command line was  $ ./configure
> CPPFLAGS=/home/users/luizfcs/LIS/netcdf/include
> LDFLAGS=/home/users/luizfcs/LIS/netcdf/lib
> --prefix=/home/users/luizfcs/LIS/netcdf## --------- #### Platform. ####
> --------- ##hostname = service1uname -m = x86_64uname -r =
> 3.12.44-52.10-defaultuname -s = Linuxuname -v = #1 SMP Wed Jul 15 22:18:05
> UTC 2015 (a6f3717)/usr/bin/uname -p = x86_64/bin/uname -X     =
> unknown/bin/arch              = x86_64/usr/bin/arch -k       =
> unknown/usr/convex/getsysinfo = unknown/usr/bin/hostinfo      =
> unknown/bin/machine           = unknown/usr/bin/oslevel       =
> unknown/bin/universe          = unknownPATH: /opt/sgi/sbinPATH:
> /opt/sgi/binPATH: /usr/local/binPATH: /usr/binPATH: /binPATH:
> /usr/bin/X11PATH: /usr/gamesPATH: /opt/c3/binPATH:
> /opt/pbs/default/binPATH: /sbinPATH: /bin## ----------- #### Core tests.
> #### ----------- ##configure:2736: netCDF-Fortran 4.4.4configure:2776:
> checking build system typeconfigure:2790: result:
> x86_64-unknown-linux-gnuconfigure:2810: checking host system
> typeconfigure:2823: result: x86_64-unknown-linux-gnuconfigure:2845:
> checking target system typeconfigure:2858: result:
> x86_64-unknown-linux-gnuconfigure:2902: checking for a BSD-compatible
> installconfigure:2970: result: /usr/bin/install -cconfigure:2981: checking
> whether build environment is saneconfigure:3036: result: yesconfigure:3187:
> checking for a thread-safe mkdir -pconfigure:3226: result: /usr/bin/mkdir
> -pconfigure:3233: checking for gawkconfigure:3249: found
> /usr/bin/gawkconfigure:3260: result: gawkconfigure:3271: checking whether
> make sets $(MAKE)configure:3293: result: yesconfigure:3322: checking
> whether make supports nested variablesconfigure:3339: result:
> yesconfigure:3465: checking whether to enable maintainer-specific portions
> of Makefilesconfigure:3474: result: noconfigure:3491: checking user
> optionsconfigure:3495: checking whether extra valgrind tests should be
> runconfigure:3503: result: noconfigure:3507: checking whether parallel IO
> tests should be runconfigure:3515: result: noconfigure:3519: checking
> whether netCDF extra tests should be run (developers only)configure:3527:
> result: noconfigure:3584: checking for doxygenconfigure:3614: result:
> noconfigure:3623: WARNING: Doxygen not found - documentation will not be
> builtconfigure:3633: checking for dotconfigure:3649: found
> /usr/bin/dotconfigure:3660: result: dotconfigure:3699: finding C
> compilerconfigure:3750: checking for gccconfigure:3766: found
> /usr/bin/gccconfigure:3777: result: gccconfigure:4006: checking for C
> compiler versionconfigure:4015: gcc --version >&5gcc (SUSE Linux)
> 4.8.5Copyright (C) 2015 Free Software Foundation, Inc.This is free
> software; see the source for copying conditions.  There is NOwarranty; not
> even for MERCHANTABILITY or FITNESS FOR A PARTICULAR
> PURPOSE.configure:4026: $? = 0configure:4015: gcc -v >&5Using built-in
> specs.COLLECT_GCC=gccCOLLECT_LTO_WRAPPER=/usr/lib64/gcc/x86_64-suse-linux/4.8/lto-wrapperTarget:
> x86_64-suse-linuxConfigured with: ../configure --prefix=/usr
> --infodir=/usr/share/info --mandir=/usr/share/man --libdir=/usr/lib64
> --libexecdir=/usr/lib64
> --enable-languages=c,c++,objc,fortran,obj-c++,java,ada
> --enable-checking=release --with-gxx-include-dir=/usr/include/c++/4.8
> --enable-ssp --disable-libssp --disable-plugin
> --with-bugurl=http://bugs.opensuse.org/ <http://bugs.opensuse.org/>
> --with-pkgversion='SUSE Linux' --disable-libgcj --disable-libmudflap
> --with-slibdir=/lib64 --with-system-zlib --enable-__cxa_atexit
> --enable-libstdcxx-allocator=new --disable-libstdcxx-pch
> --enable-version-specific-runtime-libs --enable-linker-build-id
> --enable-linux-futex --program-suffix=-4.8 --without-system-libunwind
> --with-arch-32=i586 --with-tune=generic --build=x86_64-suse-linux
> --host=x86_64-suse-linuxThread model: posixgcc version 4.8.5 (SUSE
> Linux)configure:4026: $? = 0configure:4015: gcc -V >&5gcc: error:
> unrecognized command line option '-V'gcc: fatal error: no input
> filescompilation terminated.configure:4026: $? = 1configure:4015: gcc
> -qversion >&5gcc: error: unrecognized command line option '-qversion'gcc:
> fatal error: no input filescompilation terminated.configure:4026: $? =
> 1configure:4046: checking whether the C compiler worksconfigure:4068: gcc
> /home/users/luizfcs/LIS/netcdf/include /home/users/luizfcs/LIS/netcdf/lib
> conftest.c  >&5/home/users/luizfcs/LIS/netcdf/include: file not recognized:
> Is a directorycollect2: error: ld returned 1 exit statusconfigure:4072: $?
> = 1configure:4110: result: noconfigure: failed program was:| /* confdefs.h
> */| #define PACKAGE_NAME "netCDF-Fortran"| #define PACKAGE_TARNAME
> "netcdf-fortran"| #define PACKAGE_VERSION "4.4.4"| #define PACKAGE_STRING
> "netCDF-Fortran 4.4.4"| #define PACKAGE_BUGREPORT
> "address@hidden <address@hidden>"|
> #define PACKAGE_URL ""| #define PACKAGE "netcdf-fortran"| #define VERSION
> "4.4.4"| /* end confdefs.h.  */|| int| main ()| {||   ;|   return 0;| }
> configure:4115: error: in
> `/home/users/luizfcs/netcdf-fortran-4.4.4':configure:4117: error: C
> compiler cannot create executablesSee `config.log' for more details##
> ---------------- #### Cache variables. #### ----------------
> ##ac_cv_build=x86_64-unknown-linux-gnuac_cv_env_CC_set=ac_cv_env_CC_value=ac_cv_env_CFLAGS_set=ac_cv_env_CFLAGS_value=ac_cv_env_CPPFLAGS_set=setac_cv_env_CPPFLAGS_value=/home/users/luizfcs/LIS/netcdf/includeac_cv_env_CPP_set=ac_cv_env_CPP_value=ac_cv_env_F77_set=ac_cv_env_F77_value=ac_cv_env_FCFLAGS_set=ac_cv_env_FCFLAGS_value=ac_cv_env_FC_set=ac_cv_env_FC_value=ac_cv_env_FFLAGS_set=ac_cv_env_FFLAGS_value=ac_cv_env_LDFLAGS_set=setac_cv_env_LDFLAGS_value=/home/users/luizfcs/LIS/netcdf/libac_cv_env_LIBS_set=ac_cv_env_LIBS_value=ac_cv_env_build_alias_set=ac_cv_env_build_alias_value=ac_cv_env_host_alias_set=ac_cv_env_host_alias_value=ac_cv_env_target_alias_set=ac_cv_env_target_alias_value=ac_cv_host=x86_64-unknown-linux-gnuac_cv_path_install='/usr/bin/install
> -c'ac_cv_path_mkdir=/usr/bin/mkdirac_cv_prog_AWK=gawkac_cv_prog_DOT=dotac_cv_prog_ac_ct_CC=gccac_cv_prog_make_make_set=yesac_cv_target=x86_64-unknown-linux-gnuam_cv_make_support_nested_variables=yes##
> ----------------- #### Output variables. #### -----------------
> ##ACLOCAL='${SHELL} /home/users/luizfcs/netcdf-fortran-4.4.4/missing
> aclocal-1.14'ALLOCA=''AMDEPBACKSLASH=''AMDEP_FALSE=''AMDEP_TRUE=''AMTAR='$${TAR-tar}'AM_BACKSLASH='\'AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)'AM_DEFAULT_VERBOSITY='1'AM_V='$(V)'AR=''AUTOCONF='${SHELL}
> /home/users/luizfcs/netcdf-fortran-4.4.4/missing
> autoconf'AUTOHEADER='${SHELL}
> /home/users/luizfcs/netcdf-fortran-4.4.4/missing
> autoheader'AUTOMAKE='${SHELL}
> /home/users/luizfcs/netcdf-fortran-4.4.4/missing
> automake-1.14'AWK='gawk'BUILD_BENCHMARKS_FALSE=''BUILD_BENCHMARKS_TRUE=''BUILD_DAP_FALSE=''BUILD_DAP_TRUE=''BUILD_DLL_FALSE=''BUILD_DLL_TRUE=''BUILD_DOCS_FALSE=''BUILD_DOCS_TRUE='#'BUILD_F03_FALSE=''BUILD_F03_TRUE=''BUILD_INTERNAL_DOCS='no'BUILD_PARALLEL_FALSE=''BUILD_PARALLEL_TRUE=''BUILD_V2_FALSE=''BUILD_V2_TRUE=''CC='gcc'CCDEPMODE=''CFLAGS=''CPP=''CPPFLAGS='/home/users/luizfcs/LIS/netcdf/include'CYGPATH_W='echo'DEFS=''DEPDIR=''DLLTOOL=''DOT='dot'DOXYGEN=''DSYMUTIL=''DUMPBIN=''ECHO_C=''ECHO_N='-n'ECHO_T=''EGREP=''EXEEXT=''EXTRA_EXAMPLE_TESTS_FALSE=''EXTRA_EXAMPLE_TESTS_TRUE=''EXTRA_TESTS_FALSE=''EXTRA_TESTS_TRUE='#'F77=''FC=''FCFLAGS=''FCFLAGS_f90=''FFLAGS=''FGREP=''
> GREP=''HAS_DAP=''HAS_F03=''HAS_F90=''HAS_NC2=''HAS_NC4=''HAVE_DOT='NO'INSTALL_DATA='${INSTALL}
> -m
> 644'INSTALL_PROGRAM='${INSTALL}'INSTALL_SCRIPT='${INSTALL}'INSTALL_STRIP_PROGRAM='$(install_sh)
> -c
> -s'LARGE_FILE_TESTS_FALSE=''LARGE_FILE_TESTS_TRUE=''LD=''LDFLAGS='/home/users/luizfcs/LIS/netcdf/lib'LIBOBJS=''LIBS=''LIBTOOL=''LIPO=''LN_S=''LTLIBOBJS=''MAINT='#'MAINTAINER_MODE_FALSE=''MAINTAINER_MODE_TRUE='#'MAKEINFO='${SHELL}
> /home/users/luizfcs/netcdf-fortran-4.4.4/missing
> makeinfo'MANIFEST_TOOL=''MKDIR_P='/usr/bin/mkdir
> -p'MOD_FLAG=''NC_FLIBS=''NC_LIBS=''NM=''NMEDIT=''NMFLAGS=''OBJDUMP=''OBJEXT=''OTOOL64=''OTOOL=''PACKAGE='netcdf-fortran'PACKAGE_BUGREPORT='address@hidden
> <address@hidden>'PACKAGE_NAME='netCDF-Fortran'PACKAGE_STRING='netCDF-Fortran
> 4.4.4'PACKAGE_TARNAME='netcdf-fortran'PACKAGE_URL=''PACKAGE_VERSION='4.4.4'PATH_SEPARATOR=':'RANLIB=''SED=''SET_MAKE=''SHELL='/bin/sh'STRIP=''TEST_PARALLEL_FALSE=''TEST_PARALLEL_TRUE=''UPPER_CASE_MOD_FALSE=''UPPER_CASE_MOD_TRUE=''USE_LOGGING_FALSE=''USE_LOGGING_TRUE=''USE_NETCDF4_FALSE=''USE_NETCDF4_TRUE=''USE_VALGRIND_TESTS_FALSE=''USE_VALGRIND_TESTS_TRUE=''VERSION='4.4.4'ac_ct_AR=''ac_ct_CC='gcc'ac_ct_DUMPBIN=''ac_ct_F77=''ac_ct_FC=''am__EXEEXT_FALSE=''am__EXEEXT_TRUE=''am__fastdepCC_FALSE=''am__fastdepCC_TRUE=''am__include=''am__isrc=''am__quote=''am__tar='$${TAR-tar}
> chof - "$$tardir"'am__untar='$${TAR-tar} xf
> -'bindir='${exec_prefix}/bin'build='x86_64-unknown-linux-gnu'build_alias=''build_cpu='x86_64'build_os='linux-gnu'build_vendor='unknown'datadir='${datarootdir}'datarootdir='${prefix}/share'docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'dvidir='${docdir}'exec_prefix='NONE'host='x86_64-unknown-linux-gnu'host_alias=''host_cpu='x86_64'host_os='linux-gnu'host_vendor='unknown'htmldir='${docdir}'includedir='${prefix}/include'infodir='${datarootdir}/info'install_sh='${SHELL}
> /home/users/luizfcs/netcdf-fortran-4.4.4/install-sh'libdir='${exec_prefix}/lib'libexecdir='${exec_prefix}/libexec'localedir='${datarootdir}/locale'localstatedir='${prefix}/var'mandir='${datarootdir}/man'mkdir_p='$(MKDIR_P)'oldincludedir='/usr/include'pdfdir='${docdir}'prefix='/home/users/luizfcs/LIS/netcdf'program_transform_name='s,x,x,'psdir='${docdir}'sbindir='${exec_prefix}/sbin'sharedstatedir='${prefix}/com'sysconfdir='${prefix}/etc'target='x86_64-unknown-linux-gnu'target_alias=''target_cpu='x86_64'target_os='linux-gnu'target_vendor='unknown'##
> ----------- #### confdefs.h. #### ----------- ##/* confdefs.h */#define
> PACKAGE_NAME "netCDF-Fortran"#define PACKAGE_TARNAME
> "netcdf-fortran"#define PACKAGE_VERSION "4.4.4"#define PACKAGE_STRING
> "netCDF-Fortran 4.4.4"#define PACKAGE_BUGREPORT
> "address@hidden <address@hidden>"#define
> PACKAGE_URL ""#define PACKAGE "netcdf-fortran"#define VERSION
> "4.4.4"configure: exit 77*
> 
> 
> 
> 
> 
> 
> 
> *Luiz Filippe Silva*
> *Meteorologista e TÃcnico em Meteorologia.*
> 
> 


Ticket Details
===================
Ticket ID: RGA-191101
Department: Support netCDF
Priority: Normal
Status: Closed
===================
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NOTE: All email exchanges with Unidata User Support are recorded in the Unidata inquiry tracking system and then made publicly available through the web. If you do not want to have your interactions made available in this way, you must let us know in each email you send to us.