Brian, > So /opt is where all of the non-system stuff is installed, like hdf5, blas, > lapack, zlib, etc... There is nothing in there that I haven't installed. > Unfortunately, I don't have a 10.8+ Mac to test, but will try to get a Mac up > to 10.8 this week. I wondered about that, but didn't see the setting for LDFLAGS=-L/opt/lib that I would expect to see if you were linking to libraries with headers in /opt/include, such as libcurl, libhdf5, etc. The typical way to build and check the netCDF-4.3.0 is something like: ./configure --prefix=/opt CPPFLAGS=-I/opt/include LDFLAGS=/opt/lib make check sudo make install and then build the netcdf-fortran library similarly, as described here: http://www.unidata.ucar.edu/netcdf/docs/build_default.html and here: http://www.unidata.ucar.edu/netcdf/docs/netcdf-fortran-install.html You might try this on MacOS-X 10.6.8 before upgrading to 10.8 ... --Russ > Thanks, > brian > > > <::><::><::><::><::><::><::><::> > Brian O. Blanton, Ph.D. > Senior Scientist, Oceanographer > Renaissance Computing Institute > University of North Carolina at Chapel Hill > 100 Europa Drive > Suite 540 Chapel Hill, NC, 27517 > > address@hidden > 919-445-9620 (O) > 919-445-9669 (F) > > > > <::><::><::><::><::><::><::><::> > > ________________________________________ > From: Unidata netCDF Support address@hidden > Sent: Sunday, June 09, 2013 4:08 PM > To: Brian Blanton > Cc: address@hidden > Subject: [netCDF #GSF-826536]: build of 4.3 with dap support fails > > Hi Brian, > > > Full Name: Brian Blanton > > Organization: The University of North Carolina at Chapel Hill > > Package Version: 4.3 > > Operating System: MAC OS X 10.6.8 > > Hardware: Mac Pro, 12-core > > Description of problem: > > > > When building 4.3 with dap enabled, the following error occurs: > > > > Making all in libdap2 > > /bin/sh ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. > > -I../include -I../oc2 -I../libsrc4 -I/opt/include -g -O2 -MT > > libdap2_la-daputil.lo -MD -MP -MF .deps/libdap2_la-daputil.Tpo -c -o > > libdap2_la-daputil.lo `test -f 'daputil.c' || echo './'`daputil.c > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -I../include -I../oc2 > > -I../libsrc4 -I/opt/include -g -O2 -MT libdap2_la-daputil.lo -MD -MP -MF > > .deps/libdap2_la-daputil.Tpo -c daputil.c -fno-common -DPIC -o > > .libs/libdap2_la-daputil.o > > In file included from ncdap3.h:12, > > from daputil.c:16: > > /usr/include/unistd.h:117: error: two or more data types in declaration > > specifiers > > make: *** [libdap2_la-daputil.lo] Error 1 > > make: *** [all-recursive] Error 1 > > make: *** [all] Error 2 > > I can't duplicate the problem on OSX 10.8.4. > > I notice in the conf.log output you attached, you have this: > > checking CPPFLAGS... -I/opt/include > > which may be the cause of the problem. That CPPFLAGS setting to /opt/include > may be including a version of a standard Unix header file that conflicts with > the > header files in /usr/include. Could you try again, unsetting CPPFLAGS first, > and > see if the error still occurs? > > --Russ > > Russ Rew UCAR Unidata Program > address@hidden http://www.unidata.ucar.edu > > > > Ticket Details > =================== > Ticket ID: GSF-826536 > Department: Support netCDF > Priority: Normal > Status: Closed > > > Russ Rew UCAR Unidata Program address@hidden http://www.unidata.ucar.edu Ticket Details =================== Ticket ID: GSF-826536 Department: Support netCDF Priority: Normal Status: Closed
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