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I am trying to build under OS X. In building the HDF library using
the command (note the sudo so I should have access):
sudo ./configure --with-zlib=/usr/local --prefix=/usr/local && make install
I get:
gcc -DHAVE_CONFIG_H -I. -I. -I. -DH5_DEBUG_API -DH5Z_DEBUG
-DH5V_DEBUG -DH5T_DEBUG -DH5S_DEBUG -DH5P_DEBUG -DH5O_DEBUG
-DH5MM_DEBUG -DH5I_DEBUG -DH5HG_DEBUG -DH5G_DEBUG -DH5F_DEBUG
-DH5E_DEBUG -DH5D_DEBUG -UNDEBUG -I/usr/local/include -std=c99
-pedantic -Wall -Wextra -Wundef -Wshadow -Wpointer-arith
-Wbad-function-cast -Wcast-qual -Wcast-align -Wwrite-strings
-Wconversion -Wsign-compare -Waggregate-return -Wstrict-prototypes
-Wmissing-prototypes -Wmissing-declarations -Wredundant-decls
-Wnested-externs -Winline -Wno-long-long -Wfloat-equal
-Wmissing-format-attribute -Wpadded -Wmissing-noreturn -Wpacked
-Wdisabled-optimization -Wmultichar -Wendif-labels
-Wdeclaration-after-statement -Wold-style-definition -Winvalid-pch
-Wvariadic-macros -g -fverbose-asm -MT H5.lo -MD -MP -MF .deps/H5.Tpo
-c H5.c -fno-common -DPIC -o .libs/H5.o
In file included from H5Fprivate.h:26,
from H5ACprivate.h:38,
from H5Bprivate.h:35,
from H5.c:19:
H5FDpublic.h:190: warning: padding struct size to alignment boundary
In file included from H5Oprivate.h:39,
from H5Dprivate.h:26,
from H5.c:20:
H5HGprivate.h:38: warning: padding struct size to alignment boundary
In file included from H5Dprivate.h:26,
from H5.c:20:
H5Oprivate.h:123: warning: padding struct size to alignment boundary
H5Oprivate.h:216: warning: padding struct size to alignment boundary
In file included from H5.c:20:
H5Dprivate.h:180: warning: padding struct size to alignment boundary
In file included from H5.c:28:
H5Sprivate.h:82: warning: padding struct size to alignment boundary
H5.c:3116: fatal error: opening dependency file .deps/H5.Tpo: Permission denied
compilation terminated.
make[1]: *** [H5.lo] Error 1
make: *** [install-recursive] Error 1
More than what I know. Anyone have Mac binaries of the whole thing?
-Roy
--
**********************
"The contents of this message do not reflect any position of the U.S.
Government or NOAA."
**********************
Roy Mendelssohn
Supervisory Operations Research Analyst
NOAA/NMFS
Environmental Research Division
Southwest Fisheries Science Center
1352 Lighthouse Avenue
Pacific Grove, CA 1993950-2097
e-mail: Roy.Mendelssohn@xxxxxxxx (Note new e-mail address)
voice: (831)-648-9029
fax: (831)-648-8440
www: http://www.pfeg.noaa.gov/
"Old age and treachery will overcome youth and skill."
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