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20040407: compiling netCDF library on Llinux

>From: Chul Eddy Chung <address@hidden>
>Organization: Scripps Institution of Oceanography
>Keywords: 200404072040.i37KecCT015750 netCDF pgF90 Intel

Hi Chul,

>I downloaded netcdf-3.5.1 tar package, and am trying to compile on my 
>Linux machine (kernel: 2.4).  I have two linux machines.  On one 
>machine, I have PGI, and on the other one I have Intel f90.  In two 
>various, I tried various options by setting environments (such as 
>"export CC=pgcc").  I tried various combinations of gcc, c++, pgcc, 
>pgCC, pgf90, f90 (intel fortran), f77, etc., and I get similar 
>compilation messages when I executed "Makefile".

You are missing one environment variable definition.  Please try
the following for your PGI build.  First, set the environment
variables as follows:

# Define environment variables
CC=pgcc
CPPFLAGS='-DNDEBUG -DpgiFortran'
CFLAGS=-O
FC=pgf90
FFLAGS='-O -w'
CXX=pgCC

Next:

make distclean

Then:

./configure

If this works (it should):

make

Please let us know if this solves your problem.

The above settings were taken from the Installation instructions for
the netCDF:

http://my.unidata.ucar.edu/content/software/netcdf/INSTALL.html

For information on using the Intel Fortran compiler, please review:

http://www.unidata.ucar.edu/packages/netcdf/other-builds.html#intel-ifc

Cheers,

Tom Yoksas

>Here is the log:
>
>On the machine having intel f90:
>[Eddy@cocos src]$ configure
>creating cache ./config.cache
>checking for top-level source-directory
>/home/Eddy/temp/netcdf-3.5.1/src
>checking for m4 preprocessor
>checking for m4... m4
>checking m4 flags... -B10000
>checking C compiler "gcc"... works
>checking how to make dependencies... false
>checking for c++... c++
>checking C++ compiler "c++"... works
>checking how to run the C preprocessor... gcc -E
>checking user-defined Fortran-77 compiler "f77"... works
>checking for Fortran .F compiler...
>checking if Fortran-77 compiler handles *.F files... yes
>checking user-defined Fortran-90 compiler ""... failed to compile test 
>program
>configure: warning: The Fortran-90 interface will not be built
>checking for nm utility
>checking for nm... nm
>checking nm flags...
>checking for C-equivalent to Fortran routine "SUB"... sub_
>checking for Fortran "byte"... yes
>checking for Fortran "integer*2"... yes
>checking if Fortran "byte" is C "signed char"... yes
>checking if Fortran "byte" is C "short"... no
>checking if Fortran "byte" is C "int"... no
>checking if Fortran "byte" is C "long"... no
>checking if Fortran "integer*2" is C "short"... yes
>checking if Fortran "integer*2" is C "int"... no
>checking if Fortran "integer*2" is C "long"... no
>checking if Fortran "integer" is C "int"... yes
>checking if Fortran "real" is C "float"... yes
>checking if Fortran "doubleprecision" is C "double"... yes
>checking for Fortran-equivalent to netCDF "byte"... byte
>checking for Fortran-equivalent to netCDF "short"... integer*2
>checking for math library
>checking for tanh in -lc... no
>checking for tanh in -lm... yes
>checking for ar utility
>checking for ar... ar
>checking ar flags... cru
>checking for nm utility
>checking for nm... (cached) nm
>checking nm flags...
>checking for ranlib... ranlib
>checking for stdlib.h... yes
>checking for sys/types.h... yes
>checking for strerror... yes
>checking for working ftruncate()... yes
>checking for working alloca.h... yes
>checking for alloca... yes
>checking for st_blksize in struct stat... yes
>checking for IEEE floating point format... yes
>checking for ANSI C header files... yes
>checking for size_t... yes
>checking for off_t... yes
>checking for ssize_t... yes
>checking for ptrdiff_t... yes
>checking for uchar... no
>checking whether char is unsigned... no
>checking whether byte ordering is bigendian... no
>checking size of short... 2
>checking size of int... 4
>checking size of long... 4
>checking size of float... 4
>checking size of double... 8
>checking size of off_t... 4
>checking size of size_t... 4
>checking for manual-page index command...
>checking binary distribution directory... /home/ftp/pub/binary/dummy_system
>updating cache ./config.cache
>creating ./config.status
>creating macros.make
>udcreating fortran/nfconfig.inc
>creating libsrc/ncconfig.h
>
>[Eddy@cocos src]$ gmake
>..........
>Returning to directory /home/Eddy/temp/netcdf-3.5.1/src
>
>gmake[1]: Leaving directory `/home/Eddy/temp/netcdf-3.5.1/src'
>gmake[1]: Entering directory `/home/Eddy/temp/netcdf-3.5.1/src'
>
>Making `all' in directory /home/Eddy/temp/netcdf-3.5.1/src/fortran
>
>gmake[2]: Entering directory `/home/Eddy/temp/netcdf-3.5.1/src/fortran'
>gcc -c -O -I../libsrc  -DNDEBUG fort-attio.c
>In file included from ncfortran.h:13,
>                 from fort-attio.c:6:
>cfortran.h:134:3: #error "cfortran.h:  Can't find your environment 
>among:    - MIPS cc and f77 2.0. (e.g. Silicon Graphics, DECstations, 
>...)         - IBM AIX XL C and FORTRAN Compiler/6000 Version 
>01.01.0000.0000         - VAX   VMS CC 3.1 and FORTRAN 
>5.4.                                      - Alpha VMS DEC C 1.3 and DEC 
>FORTRAN 6.0.                               - Alpha OSF DEC C and DEC 
>Fortran for OSF/1 AXP Version 1.2              - Apollo DomainOS 10.2 
>(sys5.3) with f77 10.7 and cc 6.7.                - 
>CRAY                                                                   - 
>NEC SX-4 SUPER-UX                                                      - 
>CONVEX                                                                 - 
>Sun                                                                    - 
>PowerStation Fortran with Visual C++                                   - 
>HP9000s300/s700/s800 Latest test with: HP-UX A.08.07 A 9000/730        - 
>LynxOS: cc or gcc with f2c.                                            - 
>VAXUltrix: vcc,cc or gcc with f2c. gcc or cc with f77.                 
>-            f77 with vcc works; but missing link magic for f77 I/O.     
>-            NO fort. None of gcc, cc or vcc generate required names.    
>- f2c    : Use #define    f2cFortran, or cc -Df2cFortran                 
>- NAG f90: Use #define NAGf90Fortran, or cc -DNAGf90Fortran              
>- Absoft UNIX F77: Use #define AbsoftUNIXFortran or cc 
>-DAbsoftUNIXFortran     - Absoft Pro Fortran: Use #define 
>AbsoftProFortran     - Portland Group Fortran: Use #define pgiFortran"
>gmake[2]: *** [fort-attio.o] Error 1
>gmake[2]: Leaving directory `/home/Eddy/temp/netcdf-3.5.1/src/fortran'
>gmake[1]: *** [subdir_target] Error 1
>gmake[1]: Leaving directory `/home/Eddy/temp/netcdf-3.5.1/src'
>gmake: *** [fortran/all] Error 2
>
>---
>let me know where is the error.
>
>-- 
>Chul Eddy Chung: Assistant Project Scientist
>Scripps Institution of Oceanography, UCSD
>Tel: 858-822-1356   Fax: 858-534-7452

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>From address@hidden  Wed Apr  7 17:13:07 2004

It solved the problem. Thanks.

Chul Eddy Chung: Assistant Project Scientist
Scripps Institution of Oceanography, UCSD
Tel: 858-822-1356   Fax: 858-534-7452