Re: [visad] Analysis of Patient medical Data

Hi Katende,

VisAD excels at plotting numerical data, especially data sampled as
multidimensional fields, including lines, surfaces, volumes, isocontours and
isosurfaces, and flow vectors.

VisAD also provides some support for categorical data, using (e.g.) line
graphs and shapes. You can plot text including labeled graph axes, as well
as arbitrary shapes. You can use it to do things like plot glyphs (squares,
triangles, or any user-defined shapes) at select data points, but it is not
dead simple out of the box—it takes a little more effort to generate these
kinds of pictures.

Lastly, VisAD provides hooks for user interaction in the form of its "direct
manipulation" support. This might be useful for creating drill-down effects
for your categorical data. For a simple example, see the "interactive scale"
demo in visad_examples.jar.

There is a large collection of source code examples available from the VisAD
web site; just download visad_examples.jar.

Also check out the VisAD Tutorial for an introduction:
http://www.ssec.wisc.edu/~billh/tutorial/index.html

And if you want to see some screenshots of VisAD in action, see:
  * http://www.unidata.ucar.edu/software/idv/gallery/
  * http://www.loci.wisc.edu/visbio/screenshots.html

HTH,
Curtis

On Thu, Sep 24, 2009 at 5:30 AM, katendey kenneth <katendeykenneth@xxxxxxxxx
> wrote:

>  Am trying to put this aspect of visualisation and analysis in my project .
>
> My analysis will be T-Test,correlation,comparative bar graph regression
> analysis and any other that can be done so that it can be presented mainly
> in 3D format.
>
> Data includes:
>
>    1. Demographics of patients(Weight,age,place of residence,head
>    circumfrence etc,level of education etc)
>    2. Clinical (Drugs,Adverse events etc)
>    3. Laboratory tests.
>
> This data is both numerical and categorical.
>
>
> Katende Kenneth Kidonge
>
> --- On *Wed, 9/23/09, Curtis Rueden <ctrueden@xxxxxxxx>* wrote:
>
>
> From: Curtis Rueden <ctrueden@xxxxxxxx>
> Subject: Re: [visad] Analysis of Patient medical Data
> To: "katendey kenneth" <katendeykenneth@xxxxxxxxx>
> Cc: visad@xxxxxxxxxxxxxxxx
> Date: Wednesday, September 23, 2009, 9:09 PM
>
>
> Hi Katende,
>
> Have you looked at ImageJ+Bio-Formats, MIPAV or ITK (e.g., Slicer3)? These
> tools are more targeted toward medical imaging. If you are looking to roll
> your own medical visualization solution though, VisAD may be a good choice.
> What sort of analysis do you need to do?
>
> -Curtis
>
> On Wed, Sep 23, 2009 at 2:09 AM, katendey kenneth <
> katendeykenneth@xxxxxxxxx <http://mc/compose?to=katendeykenneth@xxxxxxxxx>
> > wrote:
>
>>  Hullo,
>> I need help concerning the analysis procedures of VisAD mainly for patient
>> medical data.
>>
>> This data includes measured data i.e. laboratory values then the treatment
>> information to be also incorporated in the analysis.
>>
>> Thank you for any assistance offered.
>>
>>
>> Katende Kenneth Kidonge
>>
>>
>>
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>