Re: [thredds] directories only

Mark,

Check for any error in catalogInit.log at $TDS_CONTENT/thredds/logs

A.


On Tue, 24 Jul 2018, 16:22 Maciolek, Mark, <Mark.Maciolek@xxxxxxx> wrote:

> Hi,
>
> opal_catalog.xml not changed since Oct. 2016
>
>
> http://tds-opal.sr.unh.edu/thredds/catalog/opal_ts/altimeter/wav_files/jason1/c257/catalog.html
>
> no longer showing any of the files in the catalog.html
>
> I can do a ls of the directory and see all the files are there.
>
> System was updated to CentOS 7.5 last week and rebooted. Updated to
> TDS-4.6.11 today.
> Tomcat logs don't show reason why this is happening.
>
> Files are mounted vis nfs but that has been the case since the system was
> originally setup.
>
> Any suggestions on troubleshooting this issue?
>
> Current opal_catalog.xml
>
>
> <?xml version="1.0" encoding="UTF-8"?>
> <catalog name="OPAL CO2 Bouy"
>   xmlns="http://www.unidata.ucar.edu/namespaces/thredds/InvCatalog/v1.0";
>   xmlns:xlink="http://www.w3.org/1999/xlink"; version="1.0.2">
>
>         <service name="allServices" base="" serviceType="compound">
>           <service name="dapService" serviceType="OpenDAP"
> base="/thredds/dodsC/"/>
>          <service name="wcs" serviceType="WCS" base="/thredds/wcs/"/>
>                  <service name="ncss" serviceType="NetcdfSubset"
> base="/thredds/ncss/grid/"/>
>                 <service name="http" serviceType="HTTPServer"
> base="/thredds/fileServer/" />
>           <service name="uddc" serviceType="UDDC" base="/thredds/uddc/"/>
>           <service name="iso" serviceType="ISO" base="/thredds/iso/"/>
>           <service name="sos" serviceType="SOS" base="/thredds/sos/"/>
>
>                      </service>
>
>
>
>   <dataset name="OPAL Time Series Data">
>     <metadata inherited="true">
>       <serviceName>allServices</serviceName>
>       <dataType>Grid</dataType>
>       <dataFormat>NetCDF</dataFormat>
>     </metadata>
> <!--    <dataset name="opal_ts/WBD" ID="opal_ts/WBD" urlPath="opal_ts/WBD">
>          <netcdf xmlns="
> http://www.unidata.ucar.edu/namespaces/netcdf/ncml-2.2";>
>         scan location="/net/nfs/porter/raid1/data/COOA/opal_ts/WBD"
> dateFormatMark="WBD_#yyyy"
>                   regExp=".*WBD\_[0-9]{4}\.nc$" suffix=".nc"
> subdirs="false" />
>
>       </netcdf>
>     </dataset>
>     -->
> <datasetScan name="opal_ts/WBD" ID="opal_ts/WBD" path="opal_ts/WBD"
>       location="/net/nfs/porter/raid1/data/COOA/opal_ts/WBD">
>             <metadata inherited="true">
>                     <documentation type="summary"> UNH Appledore Island
> CO2 Buoy</documentation>
>                           </metadata>
>                                 <filter>
>                                         <include wildcard="*.nc"/>
>                                               </filter>
>                                                     <addDatasetSize/>
>                                                         </datasetScan>
>
> <datasetScan name="opal_ts/CML" ID="opal_ts/CML" path="opal_ts/CML"
>       location="/net/nfs/porter/raid1/data/COOA/opal_ts/CML">
>             <metadata inherited="true">
>                     <documentation type="summary"> UNH Coastal Marine
> Laboratory</documentation>
>                           </metadata>
>                                 <filter>
>                                         <include wildcard="*.nc"/>
>                                               </filter>
>                                                     <addDatasetSize/>
>                                                         </datasetScan>
>
>
> <datasetScan name="opal_ts/opal_asflux" ID="opal_ts/opal_asflux"
> path="opal_ts/opal_asflux"
>       location="/net/nfs/porter/raid1/data/COOA/opal_ts/opal_asflux">
>             <metadata inherited="true">
>                     <documentation type="summary"> Jeffrey's Ledge Air-Sea
> Flux Buoy</documentation>
>                           </metadata>
>                                 <filter>
>                                         <include wildcard="*.nc"/>
>                                               </filter>
>                                                     <addDatasetSize/>
>                                                         </datasetScan>
>
> <datasetScan name="opal_ts/altimeter/wav_files/jason1"
> ID="opal_ts/altimeter/wav_files/jason1"
> path="opal_ts/altimeter/wav_files/jason1"
>
> location="/net/nfs/porter/raid1/data/COOA/opal_ts/altimeter/wav_files/jason1">
>             <metadata inherited="true">
>                     <documentation type="summary"> Altimeter Matched with
> WaveWatch 3</documentation>
>                           </metadata>
>                                 <filter>
>                                         <include wildcard="*.nc"/>
>                                               </filter>
>                                                     <addDatasetSize/>
>                                                         </datasetScan>
>
>
> <datasetScan name="opal_ts/altimeter/wav_files/jason2"
> ID="opal_ts/altimeter/wav_files/jason2"
> path="opal_ts/altimeter/wav_files/jason2"
>
> location="/net/nfs/porter/raid1/data/COOA/opal_ts/altimeter/wav_files/jason2">
>             <metadata inherited="true">
>                     <documentation type="summary"> Altimeter Matched with
> WaveWatch 3</documentation>
>                           </metadata>
>                                 <filter>
>                                         <include wildcard="*.nc"/>
>                                               </filter>
>                                                     <addDatasetSize/>
>                                                         </datasetScan>
>
> <datasetScan name="opal_ts/altimeter/wav_files/topex"
> ID="opal_ts/altimeter/wav_files/topex"
> path="opal_ts/altimeter/wav_files/topex"
>
> location="/net/nfs/porter/raid1/data/COOA/opal_ts/altimeter/wav_files/topex">
>             <metadata inherited="true">
>                     <documentation type="summary"> Altimeter Matched with
> WaveWatch 3-TOPEX</documentation>
>                           </metadata>
>                                 <filter>
>                                         <include wildcard="*.nc"/>
>                                               </filter>
>                                                     <addDatasetSize/>
>                                                         </datasetScan>
>
> <datasetScan name="opal_ts/altimeter/wav_files/jason3"
> ID="opal_ts/altimeter/wav_files/jason3"
> path="opal_ts/altimeter/wav_files/jason3"
>
> location="/net/nfs/porter/raid1/data/COOA/opal_ts/altimeter/wav_files/jason3">
>             <metadata inherited="true">
>                     <documentation type="summary"> Altimeter Matched with
> WaveWatch 3-JASON3</documentation>
>                           </metadata>
>                                 <filter>
>                                         <include wildcard="*.nc"/>
>                                               </filter>
>                                                     <addDatasetSize/>
>                                                         </datasetScan>
>
>
>
>   </dataset>
> </catalog>
>
>
> --Mark Maciolek
> Network Administrator
> Morse Hall Rm 338
> http://www.unh.edu/research/support-units/research-computing-center
>
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