Due to the current gap in continued funding from the U.S. National Science Foundation (NSF), the NSF Unidata Program Center has temporarily paused most operations. See NSF Unidata Pause in Most Operations for details.
Hi,I use thredds as opendap server for some large netcdf-files (CF-1.0, size > 1.1GB). When selecting to download the whole file with the 'Get ASCII' or 'GET BINARY', thredds crashes with a 'Java heap error'.
I'm currently using a default memory setup, i.e. -Xmx512MB for tomcat. How much memory will I need to avoid this problem. Does DODS read the whole file at once or variable after variable, or even slice after slice? Or are there some adjustments I can make to reduce memory consumption?
Best regards, Heiko Details:DODServlet ERROR (anyExceptionHandler): java.lang.OutOfMemoryError: Java heap space
ReqState: serverClassName: 'thredds.server.opendap.NcDODSServlet' dataSet: 'XXXX.nc' requestSuffix: 'ascii' CE: '' compressOK: true InitParameters: DebugOn: '' maxNetcdfFilesCached: '10' java.lang.OutOfMemoryError: Java heap space at ucar.nc2.N3raf.readData(N3raf.java:77) at ucar.nc2.N3iosp.readData(N3iosp.java:159) at ucar.nc2.NetcdfFile.readData(NetcdfFile.java:1374) at ucar.nc2.Variable._read(Variable.java:923) at ucar.nc2.Variable.read(Variable.java:618) at thredds.server.opendap.NcSDArray.read(NcSDArray.java:102) at thredds.server.opendap.NcSDGrid.read(NcSDGrid.java:59) at opendap.servlet.AsciiWriter.writeAsc(AsciiWriter.java:95) at opendap.servlet.AsciiWriter.toASCII(AsciiWriter.java:56)at opendap.servlet.AbstractServlet.doGetASC(AbstractServlet.java:1029)
at opendap.servlet.AbstractServlet.doGet(AbstractServlet.java:1630)at thredds.server.opendap.NcDODSServlet.doGet(NcDODSServlet.java:269)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:698) at javax.servlet.http.HttpServlet.service(HttpServlet.java:803) ... Thredds-Version: Built-By: caron Built-On: 2008-02-20 22:56:05 Implementation-Title: THREDDS Data Server Implementation-Version: 3.16.33 Implementation-Vendor: UCAR/Unidata Running on tomcat 6.0.16 with jdk.1.6.0_04 on debian 4.0. -- Dr. Heiko Klein Tel. + 47 22 96 32 58 Development Section / IT Department Fax. + 47 22 69 63 55 Norwegian Meteorological Institute http://www.met.no P.O. Box 43 Blindern 0313 Oslo NORWAY
thredds
archives: