Hello Everyone,
I face very strange problem when compiling NetCDF-C 4.8.0 against
HDF5-1.10.7 and HDF5-1.12.1.
Note that HDF5 is compiled in the following manner:
LDFLAGS="-L/opt/software/zlib/1.2.11/lib"
CFLAGS="-I/opt/software/zlib/1.2.11/include"
CXXFLAGS="-I/opt/software/zlib/1.2.11/include"
FCLAGS="-I/opt/software/zlib/1.2.11/include"
ZLIB_ROOT=/opt/software/zlib/1.2.11 FC=mpifort FCFLAGS="-Ofast" CC=mpicc
CFLAGS="-Ofast" CXX=mpic++ CXXFLAGS="-Ofast" cmake ..
-DCMAKE_INSTALL_PREFIX=/opt/software/hdf/5/1.10.7-gcc_11-zlib_1-api_v18-mpich_3
-DHDF5_ENABLE_THREADSAFE=OFF -DHDF5_BUILD_CPP_LIB=OFF
-DHDF5_BUILD_FORTRAN=ON -DHDF5_BUILD_HL_LIB=ON -DHDF5_BUILD_JAVA=OFF
-DHDF5_ENABLE_Z_LIB_SUPPORT=ON -DBUILD_SHARED_LIBS=ON
-DDEFAULT_API_VERSION=v18 -DHDF5_ENABLE_PARALLEL=ON
using GCC 11.0.3. Also note, that the HDF5 compilation passed the
post-compilation tests without any fail.
But if I try to compile NetCDF-C agains that particular compilation of HDF5:
LDFLAGS="-L/opt/software/hdf/5/1.10.7-gcc_11-zlib_1-api_v18-nojava/lib"
CC=gcc CFLAGS="-Ofast
-I/opt/software/hdf/5/1.10.7-gcc_11-zlib_1-api_v18-nojava/include"
./configure --prefix=/opt/software/netcdf-c/4/4.8.0-gcc_11_hdf5_1.10.7
--enable-mmap --enable-byterange
I get the following error:
../liblib/.libs/libnetcdf.so: undefined reference to `H5Pset_fapl_http'
../liblib/.libs/libnetcdf.so: undefined reference to `H5FD_http_init'
Any suggestions where to look for the source of the problem are greatly
welcomed.
Thank you very much in advance!
Best,
Vesselin Kolev
