Re: [netcdfgroup] problems with compilation: H5DS routines undefined

• To: Momme Butenschön <mommebu@xxxxxxxx>
• Subject: Re: [netcdfgroup] problems with compilation: H5DS routines undefined
• From: Robert Latham <robl@xxxxxxxxxxx>
• Date: Sun, 29 Jun 2008 14:05:05 -0500

On Sun, Jun 29, 2008 at 04:20:55PM +0100, Momme Butenschön wrote:
> When compiling a program linking with netcdf4, hdf5 I get the following 
> error:
> 
> ifort -r8 -O2 -o ../../../bin/opa model.o ../../../lib/oce/libopa.a  
> .../../../lib/libioipsl.a -L/opt/netCDF-4/lib -lnetcdff -lnetcdf 
> -L/opt/hdf5/lib -lhdf5 
> /opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSget_num_scales'
> /opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSset_scale'
> /opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSis_scale'
> /opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSiterate_scales'
> /opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSget_scale_name'
> /opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSattach_scale'
> /opt/netCDF-4/lib/libnetcdf.so: undefined reference to `H5DSdetach_scale'
> gmake[1]: *** [../../../bin/opa] Error 1
> 
> 
> nm of libnetcdf.a and libnetcdf.so gives
> 
>          U H5DSget_num_scales
> 
> Any ideas what's going wrong?

You need one more library: "libhdf5_hl" contains the "high level hdf5"
routines.  

==rob

-- 
Rob Latham
Mathematics and Computer Science Division    A215 0178 EA2D B059 8CDF
Argonne National Lab, IL USA                 B29D F333 664A 4280 315B

• Follow-Ups:
  • Re: [netcdfgroup] problems with compilation: H5DS routines undefined
    • From: Ed Hartnett

• References:
  • [netcdfgroup] problems with compilation: H5DS routines undefined
    • From: Momme Butenschön