I'm having the exact same problem. It seems to me that the file to be
included (H5DS.h) simply isn't part of hdf5-1.8.0-alpha3 as it should
be. It is nowhere to be found. On the website of the HDF5 group it is
announced to be a part of the official 1.8 release:
I can't seem to find it in any earlier alpha versions, either. Anyone
had success building netcdf4 who can tell whether the file H5DS.h exists
on their system?
Sincerly, Ilmar Wilbers
Date: Wed, 21 Jun 2006 12:20:28 -0600
From: Jeff Whitaker <jswhit@xxxxxxxxxxx>
Subject: netcdf-4 alpha 14 and hdf5 1.8.0 alpha3
Hi all: Has anyone had success compiling netcdf-4 alpha against
1.8.0 alpha? Looks like netCDF 4 is looking for H5DS.h, but
called H5DSpublic.h. Changing the include in nc4hdf.c fixes
but then I get:
if /bin/sh ../libtool --tag=CC --mode=compile gcc
- -I. -I.. -I../fortran -I../libsrc -I/Users/jsw/include
- -I/Users/jsw/include -g -g -O2 -MT nc4hdf.lo -MD -MP -MF
- -c -o nc4hdf.lo nc4hdf.c; \
then mv -f "$depbase.Tpo" "$depbase.Plo"; else rm -f
exit 1; fi
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I. -I..
- -I../libsrc -I/Users/jsw/include -I/Users/jsw/include -g -g
nc4hdf.lo -MD -MP -MF .deps/nc4hdf.Tpo -c nc4hdf.c -fno-common
nc4hdf.c: In function 'dimscale_visitor':
nc4hdf.c:164: error: 'H5G_stat_t' has no member named 'u'
nc4hdf.c:169: warning: assignment makes integer from pointer
without a cast
nc4hdf.c:170: error: 'H5G_stat_t' has no member named 'u'
nc4hdf.c: In function 'rec_match_dimscales':
nc4hdf.c:4376: warning: comparison between pointer and integer
nc4hdf.c:4377: error: 'H5G_stat_t' has no member named 'u'
make: *** [nc4hdf.lo] Error 1
make: *** [all-recursive] Error 1
make: *** [all] Error 2
Jeffrey S. Whitaker Phone : (303)497-6313
Meteorologist FAX : (303)497-6449
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