Re: [netcdf-java] Announcing Netcdf-Java / CDM version 4.3.8 BETAandemergency shutdown procedures

Hi Antonio:

We are working on a fix for this. Thanks for reporting!

John

On 2/11/2012 11:14 AM, "Antonio S. Cofiño" wrote:
I have just downloaded the toolsUI-4.3.jar bundle, but I'm having som troubles runnint it from my windows 7 box.

This is the error message:

$ java -showversion -jar toolsUI-4.3.jar
java version "1.6.0_26"
Java(TM) SE Runtime Environment (build 1.6.0_26-b03)
Java HotSpot(TM) Client VM (build 20.1-b02, mixed mode)
ToolsUI already running - start up another copy
11-feb-2012 19:09:04 
org.springframework.context.support.AbstractApplicationContext prepareRefresh
INFO: Refreshing 
org.springframework.context.support.ClassPathXmlApplicationContext@193c0cf: 
startup date [Sat Feb 11 19:09:04 CET 2012]; root of context hierarchy
11-feb-2012 19:09:04 
org.springframework.beans.factory.xml.XmlBeanDefinitionReader 
loadBeanDefinitions
INFO: Loading XML bean definitions from class path resource 
[resources/nj22/ui/spring/application-config.xml]
Exception in thread "main" 
org.springframework.beans.factory.parsing.BeanDefinitionParsingException: Configuration 
problem: Unexpected failure during bean definition parsing
Offending resource: class path resource 
[resources/nj22/ui/spring/application-config.xml]
Bean 'mbeanExporter'; nested exception is 
org.springframework.beans.factory.parsing.BeanDefinitionParsingException: 
Configuration problem: Unable to locate Spring NamespaceHandler for XML schema 
namespace [http://www.springframework.org/schema/util]
Offending resource: class path resource 
[resources/nj22/ui/spring/application-config.xml]
Bean 'mbeanExporter'
         ->  Property 'beans'
         at 
org.springframework.beans.factory.parsing.FailFastProblemReporter.error(FailFastProblemReporter.java:68)
         at 
org.springframework.beans.factory.parsing.ReaderContext.error(ReaderContext.java:85)
         at 
org.springframework.beans.factory.xml.BeanDefinitionParserDelegate.error(BeanDefinitionParserDelegate.java:291)
         at 
org.springframework.beans.factory.xml.BeanDefinitionParserDelegate.parseBeanDefinitionElement(BeanDefinitionParserDelegate.java:497)
         at 
org.springframework.beans.factory.xml.BeanDefinitionParserDelegate.parseBeanDefinitionElement(BeanDefinitionParserDelegate.java:396)
         at 
org.springframework.beans.factory.xml.BeanDefinitionParserDelegate.parseBeanDefinitionElement(BeanDefinitionParserDelegate.java:365)
         at 
org.springframework.beans.factory.xml.DefaultBeanDefinitionDocumentReader.processBeanDefinition(DefaultBeanDefinitionDocumentReader.java:258)
         at 
org.springframework.beans.factory.xml.DefaultBeanDefinitionDocumentReader.parseDefaultElement(DefaultBeanDefinitionDocumentReader.java:153)
         at 
org.springframework.beans.factory.xml.DefaultBeanDefinitionDocumentReader.parseBeanDefinitions(DefaultBeanDefinitionDocumentReader.java:132)
         at 
org.springframework.beans.factory.xml.DefaultBeanDefinitionDocumentReader.registerBeanDefinitions(DefaultBeanDefinitionDocumentReader.java:93)
         at 
org.springframework.beans.factory.xml.XmlBeanDefinitionReader.registerBeanDefinitions(XmlBeanDefinitionReader.java:493)
         at 
org.springframework.beans.factory.xml.XmlBeanDefinitionReader.doLoadBeanDefinitions(XmlBeanDefinitionReader.java:390)
         at 
org.springframework.beans.factory.xml.XmlBeanDefinitionReader.loadBeanDefinitions(XmlBeanDefinitionReader.java:334)
         at 
org.springframework.beans.factory.xml.XmlBeanDefinitionReader.loadBeanDefinitions(XmlBeanDefinitionReader.java:302)
         at 
org.springframework.beans.factory.support.AbstractBeanDefinitionReader.loadBeanDefinitions(AbstractBeanDefinitionReader.java:143)
         at 
org.springframework.beans.factory.support.AbstractBeanDefinitionReader.loadBeanDefinitions(AbstractBeanDefinitionReader.java:178)
         at 
org.springframework.beans.factory.support.AbstractBeanDefinitionReader.loadBeanDefinitions(AbstractBeanDefinitionReader.java:149)
         at 
org.springframework.beans.factory.support.AbstractBeanDefinitionReader.loadBeanDefinitions(AbstractBeanDefinitionReader.java:212)
         at 
org.springframework.context.support.AbstractXmlApplicationContext.loadBeanDefinitions(AbstractXmlApplicationContext.java:126)
         at 
org.springframework.context.support.AbstractXmlApplicationContext.loadBeanDefinitions(AbstractXmlApplicationContext.java:92)
         at 
org.springframework.context.support.AbstractRefreshableApplicationContext.refreshBeanFactory(AbstractRefreshableApplicationContext.java:130)
         at 
org.springframework.context.support.AbstractApplicationContext.obtainFreshBeanFactory(AbstractApplicationContext.java:467)
         at 
org.springframework.context.support.AbstractApplicationContext.refresh(AbstractApplicationContext.java:397)
         at 
org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:139)
         at 
org.springframework.context.support.ClassPathXmlApplicationContext.<init>(ClassPathXmlApplicationContext.java:83)
         at ucar.nc2.ui.ToolsUI.main(ToolsUI.java:5949)
Caused by: 
org.springframework.beans.factory.parsing.BeanDefinitionParsingException: 
Configuration problem: Unable to locate Spring NamespaceHandler for XML schema 
namespace [http://www.springframework.org/schema/util]
Offending resource: class path resource 
[resources/nj22/ui/spring/application-config.xml]
Bean 'mbeanExporter'
         ->  Property 'beans'
         at 
org.springframework.beans.factory.parsing.FailFastProblemReporter.error(FailFastProblemReporter.java:68)
         at 
org.springframework.beans.factory.parsing.ReaderContext.error(ReaderContext.java:85)
         at 
org.springframework.beans.factory.parsing.ReaderContext.error(ReaderContext.java:80)
         at 
org.springframework.beans.factory.xml.BeanDefinitionParserDelegate.error(BeanDefinitionParserDelegate.java:284)
         at 
org.springframework.beans.factory.xml.BeanDefinitionParserDelegate.parseCustomElement(BeanDefinitionParserDelegate.java:1332)
         at 
org.springframework.beans.factory.xml.BeanDefinitionParserDelegate.parseNestedCustomElement(BeanDefinitionParserDelegate.java:1388)
         at 
org.springframework.beans.factory.xml.BeanDefinitionParserDelegate.parsePropertySubElement(BeanDefinitionParserDelegate.java:956)
         at 
org.springframework.beans.factory.xml.BeanDefinitionParserDelegate.parsePropertySubElement(BeanDefinitionParserDelegate.java:944)
         at 
org.springframework.beans.factory.xml.BeanDefinitionParserDelegate.parsePropertyValue(BeanDefinitionParserDelegate.java:934)
         at 
org.springframework.beans.factory.xml.BeanDefinitionParserDelegate.parsePropertyElement(BeanDefinitionParserDelegate.java:832)
         at 
org.springframework.beans.factory.xml.BeanDefinitionParserDelegate.parsePropertyElements(BeanDefinitionParserDelegate.java:697)
         at 
org.springframework.beans.factory.xml.BeanDefinitionParserDelegate.parseBeanDefinitionElement(BeanDefinitionParserDelegate.java:482)
         ... 22 more



--
Antonio S. Cofiño
Grupo de Meteorología de Santander
Dep. de Matemática Aplicada y
         Ciencias de la Computación
Universidad de Cantabria
Escuela de Caminos
Avenida de los Castros, 44
39005 Santander, Spain
Tel: (+34) 942 20 1731
Fax: (+34) 942 20 1703
http://www.meteo.unican.es
mailto:antonio.cofino@xxxxxxxxx

El 09/02/2012 21:19, John Caron escribió:
Announcing Netcdf-Java  / CDM version 4.3.8 BETA

We are feature complete on this version, but there are some major changes that need your help in testing.

In particular, version 4.3 is a complete rewrite of GRIB1 and GRIB2 file handling. Version 4.2 GRIB handling is wrong in a number of ways, especially table handling for non NCEP files, and time interval coordinate handling. If you are using CDM or TDS to read GRIB files, you want to upgrade as soon as possible. If you are running a nuclear power plant with GRIB files, please immediately do an emergency shutdown and remain offline until you can inspect.

If you are depending on the CDM/TDS to read GRIB files, you must upgrade to 4.3 AND closely examine the output of any files that you really care about. Check parameter names and everything else against the original documentation if possible, especially if there is any local parameter use. Please send us any files you suspect might be incorrectly read by the CDM library. Note that we will not backport fixes to version 4.2. Note that the variable names in 4.3 will be different from those in 4.2.

Evolving documentation for GRIB is at:http://www.unidata.ucar.edu/software/netcdf-java/formats/GribTables.html

In addition to GRIB files, version 4.3 also:

 1. handles the CF calendar attribute
    
(http://cf-pcmdi.llnl.gov/documents/cf-conventions/1.6/cf-conventions.html#calendar)
 2. allows a new syntax for calendar dates
    (http://www.unidata.ucar.edu/software/netcdf-java/CDM/CalendarDateTime.html)
 3. implements the official version of the CF 1.6 Discrete Sampling
    Geometries
    
(http://cf-pcmdi.llnl.gov/documents/cf-conventions/1.6/cf-conventions.html#discrete-sampling-geometries)
 4. supports client side certificates in OPeNDAP
 5. has functioning maven builds, with refactored modules
 6. has complete source at https://github.com/Unidata/thredds

If you need any of this, please test and give feedback now, while there is time to make changes. TDS version 4.3 (beta) will also be available shortly, but its much easier to test things with CDM and ToolsUI than in the TDS.

Thanks,
John


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