Re: [gembud] GEMPAK 6.6.0 Segmentation Faults (Mandriva 2011.0 64-bit)

Hi Kevin:  

SELinux is not installed (Mandriva doesn't default to it)

Thanks
Bill


On 6/4/12 12:47 MDT, "Tyle, Kevin R" <ktyle@xxxxxxxxxx> wrote:

>Hi Bill,
>
>If you haven't already, check to be sure that SELinux is not enabled on
>your system, to rule out that as a problem.
>
>On Redhat/Centos, this can be found in /etc/sysconfig/selinux.  Modify
>the line that starts with SELINUX so that is set to "disabled".  Then
>reboot the system.
>
>--Kevin
>
>_____________________________________________
>Kevin Tyle, Systems Administrator
>Dept. of Atmospheric & Environmental Sciences
>University at Albany
>Earth Science 235, 1400 Washington Avenue
>Albany, NY 12222
>Email: ktyle@xxxxxxxxxx
>Phone: 518-442-4578
>_____________________________________________
>
>
>-----Original Message-----
>From: gembud-bounces@xxxxxxxxxxxxxxxx
>[mailto:gembud-bounces@xxxxxxxxxxxxxxxx] On Behalf Of Capehart, William J
>Sent: Monday, June 04, 2012 2:38 PM
>To: gembud@xxxxxxxxxxxxxxxx
>Subject: Re: [gembud] GEMPAK 6.6.0 Segmentation Faults (Mandriva 2011.0
>64-bit)
>
>Hi All
>
>I've tried compiling OM 2.3.3 and 2.3.1 from source and have also tried
>the Mandriva builds generously offered by James Murakami (rebuilding and
>testing after each) and unfortunately I am still coming up seg faults.
>
>In "gdb-ing" garp, nmap2 and nwx, I'm getting the following output -- all
>of them are hanging on the following:
>
>0x00007ffff5a2bc50 in __parse_one_specmb () from /lib64/libc.so.6
>
>(which is greek to me and my people here.)
>
>Any further ideas?
>
>Thanks Much
>Bill
>-----
>
>
>GARP GDB OUTPUT
>
>(crashes before gui appears,  segmentation faults out)
>
>% gdb garp
>GNU gdb (GDB) 7.1-5 (Mandriva Linux release 2011.0) Copyright (C) 2010
>Free Software Foundation, Inc.
>License GPLv3+: GNU GPL version 3 or later
><http://gnu.org/licenses/gpl.html>
>This is free software: you are free to change and redistribute it.
>There is NO WARRANTY, to the extent permitted by law.  Type "show copying"
>and "show warranty" for details.
>This GDB was configured as "x86_64-mandriva-linux-gnu".
>For bug reporting instructions, please see:
><http://www.gnu.org/software/gdb/bugs/>...
>Reading symbols from
>/usr/local/GEMPAK-6.6.0_GNU64/os/linux64/bin/garp...done.
>(gdb) run
>Starting program: /usr/local/GEMPAK-6.6.0_GNU64/os/linux64/bin/garp
>G A R P - v2.1 starting...
>
>Program received signal SIGSEGV, Segmentation fault.
>0x00007ffff5a2bc50 in __parse_one_specmb () from /lib64/libc.so.6
>(gdb) 
>
>
>
>-----------------------
>
>NMAP2 GDB OUTPUT
>
>(creates an empty gui: empty gray top bar, black veiwing area, then
>segmentation faults out)
>
>% gdb nmap2
>GNU gdb (GDB) 7.1-5 (Mandriva Linux release 2011.0) Copyright (C) 2010
>Free Software Foundation, Inc.
>License GPLv3+: GNU GPL version 3 or later
><http://gnu.org/licenses/gpl.html>
>This is free software: you are free to change and redistribute it.
>There is NO WARRANTY, to the extent permitted by law.  Type "show copying"
>and "show warranty" for details.
>This GDB was configured as "x86_64-mandriva-linux-gnu".
>For bug reporting instructions, please see:
><http://www.gnu.org/software/gdb/bugs/>...
>Reading symbols from
>/usr/local/GEMPAK-6.6.0_GNU64/os/linux64/bin/nmap2...done.
>(gdb) run
>Starting program: /usr/local/GEMPAK-6.6.0_GNU64/os/linux64/bin/nmap2
>[Thread debugging using libthread_db enabled] Finished reading tables...
>Resource File:  /usr/local/GEMPAK-6.6.0_GNU64/resource/Nmap
>
>Program received signal SIGSEGV, Segmentation fault.
>0x00007ffff580fc50 in __parse_one_specmb () from /lib64/libc.so.6
>(gdb) quit
>
>--------------
>
>
>GDB  NWX OUTPUT
>
>(opens, provides a gui, lets me poke on a station for obs data, then
>crashes with the same seg fault)
>
>% gdb nwx
>GNU gdb (GDB) 7.1-5 (Mandriva Linux release 2011.0) Copyright (C) 2010
>Free Software Foundation, Inc.
>License GPLv3+: GNU GPL version 3 or later
><http://gnu.org/licenses/gpl.html>
>This is free software: you are free to change and redistribute it.
>There is NO WARRANTY, to the extent permitted by law.  Type "show copying"
>and "show warranty" for details.
>This GDB was configured as "x86_64-mandriva-linux-gnu".
>For bug reporting instructions, please see:
><http://www.gnu.org/software/gdb/bugs/>...
>Reading symbols from
>/usr/local/GEMPAK-6.6.0_GNU64/os/linux64/bin/nwx...done.
>(gdb) run
>
>================================================================
>Bill Capehart <William.Capehart@xxxxxxxxx>   Associate Professor
>Department of Atmospheric Sciences
>213 Mineral Industries Building             Skype/EVO: wcapehart
>South Dakota School of Mines and Technology  Ph: +1-605-394-1994
>501 East Saint Joseph Street                Fax: +1-605-394-6061
>Rapid City, SD 57701-3995                Mobile: +1-605-484-5692
>=================== http://capehart.sdsmt.edu ==================
>
>________________________________________
>From: James Murakami [tenki@xxxxxxxxxxxxxx]
>Sent: Friday, June 01, 2012 4:47 PM
>To: Capehart, William J
>Cc: gembud@xxxxxxxxxxxxxxxx
>Subject: Re: [gembud] GEMPAK 6.6.0 Segmentation Faults (Mandriva 2011.0
>64-bit)
>
>Hi William,
>
>Unless Michael James says otherwise, I think you'll need to compile
>OpenMotif 2.3.3(version 2.3.2 is flawed with respect to Gempak...2.3.1 is
>O.K. if you have it).
>
>We run Gempak6.6.0 on workstations running on Mandriva 2010.2(64 bit),
>and I haven't seen the segmentation errors you describe. Garp does crash
>when you try opening NIDS data or you clear/reset some graphics, which
>have station overlays. However, since Garp isn't supported anymore, and
>you can do similar things using Nmap, it's no big deal for us.
>
>James
>
>----------------------------------------------
>James Murakami
>Staff Meteorologist/Student Affairs
>Department of Atmospheric and Oceanic Sciences University of California,
>Los Angeles
>405 Hilgard Ave.
>Los Angeles, CA  90095-1565
>
>
>   e-mail: tenki@xxxxxxxxxxxxxx<mailto:tenki@xxxxxxxxxxxxxx>
>telephone: 310-825-2418
>      Fax: 310-206-5219
>----------------------------------------------
>
>
>On 06/01/2012 03:27 PM, Capehart, William J wrote:
>Michael:
>
>OpenMotif comes as an RPM in the Mandriva-64 2011 Powerpack distribution:
>        Version: 2.3.2-1mdv2010.0
>        Currently installed version: 2.3.2-1mdv2010.0
>        Group: Development/C
>        Architecture: x86_64
>        Size: 25079 KB
>        Medium: None (installed)
>
>Do you recommend that we build a /usr/local/ install of it?
>
>From: Michael James <mjamesis@xxxxxxxxx<mailto:mjamesis@xxxxxxxxx>>
>To: "gembud@xxxxxxxxxxxxxxxx<mailto:gembud@xxxxxxxxxxxxxxxx>"
><gembud@xxxxxxxxxxxxxxxx<mailto:gembud@xxxxxxxxxxxxxxxx>>
>Subject: Re: [gembud] GEMPAK 6.6.0 Segmentation Faults (Mandriva 2011.0
>64-bit)
>
>William,
>
>I've seen this happen with NPROGS when OpenMotif is installed as a
>pre-compiled RPM.  Is that the case here or did you build OpenMotif from
>source?
>
>-Michael
>
>On Fri, Jun 1, 2012 at 3:47 PM, Capehart, William J
><William.Capehart@xxxxxxxxx<mailto:William.Capehart@xxxxxxxxx>> wrote:
>We've been able to install GEMPAK 6.6.0 on our Mandriva 2011.0 (64-bit)
>machines and have had good results with the command line programs (e.g,.
>SFLIST) as well as the graphics scripts (e.g., SFMAP).
>
>However, with the GUIs, we've had nothing but segmentation faults for
>NMAP2 and GARP.
>
>Sample for NMAP2:
>/home/temp/gempaktest]% nmap2
>Finished reading tables...
>Resource File:  /usr/local/GEMPAK-6.6.0_GNU64/resource/Nmap
>(empty gray GUI comes on the screen very briefly and then...)
>Segmentation fault (core dumped)
>
>Other Sample for GARP
>temp@sky:/home/temp/gempaktest]% garp
>G A R P - v2.1 starting...
>Segmentation fault (core dumped)
>(no flash of a GUI at all)
>
>We get good results with NSHARP.  NWX runs but does not access any of the
>data.
>
>We have  Open Motif 2.3.2 and the gcc/gfortran 4.6.1 compilers
>
>Our Makefile seems to be pointing at the correct libraries and
>includes....
>
>Has anyone else had luck building with Mandriva and recent versions of
>GEMPAK?
>
>
>================================================================
>Bill Capehart 
><William.Capehart@xxxxxxxxx<mailto:William.Capehart@xxxxxxxxx>>
>Associate Professor
>Department of Atmospheric Sciences
>213 Mineral Industries Building             Skype/EVO: wcapehart
>South Dakota School of Mines and Technology  Ph:
>+1-605-394-1994<tel:%2B1-605-394-1994>
>501 East Saint Joseph Street                Fax:
>+1-605-394-6061<tel:%2B1-605-394-6061>
>Rapid City, SD 57701-3995                Mobile:
>+1-605-484-5692<tel:%2B1-605-484-5692>
>=================== http://capehart.sdsmt.edu ==================
>
>
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>
>
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