Dear list members,
I am trying to build the netCDF-C libraries v4.5.0 RC2 with parallel
support on a Quadcore Macbook Pro with 16GB RAM running macOS Sierra (OS X
10.12.6).
I am using MacPorts to install both GCC 7.0 and MPICH v3.2.
I then compiled udunits, zlib, PnetCDF and HDF5 all successfully, with all
tests passing. Particularly, this is how I built HDF5 v1.10.1:
# define environment variables
export DYLD_LIBRARY_PATH=/usr/local/cesm-software/lib
./configure FC=mpif90 CC=mpicc CXX=mpicxx --prefix=/usr/local/cesm-software
--enable-parallel --with-zlib=/usr/local/cesm-software
make; sudo make install; sudo make check-install
As I mentioned before, all HDF5 tests finished successfully. And this is
how I am trying to build the ncetcdf-c libraries:
# define environment variables
export UTILDIR="/usr/local/cesm-software"
./configure CC=mpicc FC=mpif90 F77=mpif90 --prefix=/usr/local/cesm-software
--disable-dap --disable-shared --enable-pnetcdf --enable-parallel-tests
CPPFLAGS="-DgFortran -I${UTILDIR}/include" LDFLAGS="-L${UTILDIR}/lib"
LIBS="-lhdf5_hl -lhdf5 -lz -ldl -lm"
make; sudo make install; sudo make check
The configure and make commands apparently finish successfully, but all 27
make-check tests fail. Please see both config.log and test-suite.log
attached to this message.
Based on the information I provided, does anyone have any tips on what can
be causing the tests to fail and how to fix it?
Thanks in advance,
Thiago.
--
*Thiago Veloso dos Santos*
*PhD student*
*Land and Atmospheric Science*
*University of Minnesota*
Attachment:
config.log
Description: Binary data
Attachment:
test-suite.log
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