[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

[netCDF #XJH-813329]: Error in building netCDF 4.6.1 (parallel) with hdf5 (parallel) and pnetcdf

Hello,

My apologies for the delayed response!  Can you tell us which version of hdf5 
you have installed?

Thanks!

-Ward

> Hi,
> 
> I am trying to build netcdf-C 4.6.1 on ubuntu 16.04 LTS with pnetcdf and
> hdf5 (parallel).  During the "make check" procedure, one of the tests
> failed (FAIL: tst_filter.sh) and it said "See nc_test4/test-suite.log".
> 
> Inside nc_test4/test-suite.log:
> 
> ===========================================
> netCDF 4.6.1: nc_test4/test-suite.log
> ===========================================
> 
> # TOTAL: 66
> # PASS:  65
> # SKIP:  0
> # XFAIL: 0
> # FAIL:  1
> # XPASS: 0
> # ERROR: 0
> 
> .. contents:: :depth: 2
> 
> FAIL: tst_filter
> ================
> 
> findplugin.sh loaded
> ***Fail: Could not locate a usable HDF5_PLUGIN_PATH
> FAIL tst_filter.sh (exit status: 1)
> 
> 
> Here is how I attempted to build netcdf (in tcsh):
> 
> setenv CC mpicc
> setenv CPPFLAGS "-I${pnetcdfDIR}/include -I${hdf5DIR}/include"
> setenv LDFLAGS "-L${pnetcdfDIR}/lib -L${hdf5DIR}/lib"
> 
> ./configure --disable-shared --enable-pnetcdf --prefix=${NCDIR}
> make check
> 
> I couldn't figure it out how to fix it.  I have checked my HDF5 and pnetcdf
> are installed.  Could you help me to fix this problem please?
> 
> Many thanks,
> 
> Kelvin
> 
> 


Ticket Details
===================
Ticket ID: XJH-813329
Department: Support netCDF
Priority: Critical
Status: Closed
===================
NOTE: All email exchanges with Unidata User Support are recorded in the Unidata 
inquiry tracking system and then made publicly available through the web.  If 
you do not want to have your interactions made available in this way, you must 
let us know in each email you send to us.