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3.12.03 cache/bz2



Good Monday Morning.

Continuing from last week.   Grabbed 3.12.03, nuked
~tomcat/webapps/thredds directory, restarted tomcat with new war
file.

Catalog root for test server:

http://daved.ims.uaf.edu:8080/thredds/catalog.html

Catalog = http://daved.ims.uaf.edu:8080/thredds/catalog.xml

The GFS directory has a gz and bz2 netcdf file and regular netcdf
files.  ID=GFSscan.
The filter option in the catalog for GFSscan:

    <filter>
      <include wildcard="*"/>
    </filter>

I had unpacked tomcat 5.5.17 in a directory owned by myself. 
Installed the latest war file and started up the server as myself,
so permissions on the content/thredds/cache should be writable.

gz still decompresses in-place instead of content/thredds/cache.

The bz2 file is still unknown.  "]DODServlet ERROR: Cant read
/space/data/GFS/gfs_20060720_12z.nc.bz2: not a valid NetCDF file."
This occurs after clicking on the OPENDAP access point.

General permission information:
address@hidden apache-tomcat-5.5.17]$ touch
content/thredds/cache/test_file

address@hidden apache-tomcat-5.5.17]$ bin/shutdown.sh
Using CATALINA_BASE:   /usr/local/apache-tomcat-5.5.17
Using CATALINA_HOME:   /usr/local/apache-tomcat-5.5.17
Using CATALINA_TMPDIR: /usr/local/apache-tomcat-5.5.17/temp
Using JRE_HOME:       /usr/local/java
address@hidden apache-tomcat-5.5.17]$ bin/startup.sh
Using CATALINA_BASE:   /usr/local/apache-tomcat-5.5.17
Using CATALINA_HOME:   /usr/local/apache-tomcat-5.5.17
Using CATALINA_TMPDIR: /usr/local/apache-tomcat-5.5.17/temp
Using JRE_HOME:       /usr/local/java

address@hidden apache-tomcat-5.5.17]$ ls -ld content/thredds/cache
drwxr-xr-x  2 cermak users 4096 Aug 14 11:59 content/thredds/cache/

address@hidden apache-tomcat-5.5.17]$ ps waxu | grep tomcat
cermak   21477  1.1  2.0 290872 43368 pts/13   Sl   11:43   0:11
/usr/local/java/bin/java
-Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager
-Djava.util.logging.config.file=/usr/local/apache-tomcat-5.5.17/conf/logging.properties
-Djava.endorsed.dirs=/usr/local/apache-tomcat-5.5.17/common/endorsed
-classpath
:/usr/local/apache-tomcat-5.5.17/bin/bootstrap.jar:/usr/local/apache-tomcat-5.5.17/bin/commons-logging-api.jar
-Dcatalina.base=/usr/local/apache-tomcat-5.5.17
-Dcatalina.home=/usr/local/apache-tomcat-5.5.17
-Djava.io.tmpdir=/usr/local/apache-tomcat-5.5.17/temp
org.apache.catalina.startup.Bootstrap start

Let me know what I can try do or change or you need more information.

address@hidden apache-tomcat-5.5.17]$ uname -a
Linux daved.ims.uaf.edu 2.6.17.7 #1 Fri Jul 28 09:35:58 AKDT 2006
i686 Intel(R) Pentium(R) 4 CPU 3.40GHz unknown GNU/Linux

address@hidden apache-tomcat-5.5.17]$ java -version
java version "1.5.0_06"
Java(TM) 2 Runtime Environment, Standard Edition (build 1.5.0_06-b05)
Java HotSpot(TM) Client VM (build 1.5.0_06-b05, mixed mode, sharing)

Rob


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