> Hi, I reconfigure with: > > CPPFLAGS="-DgFortran -I/opt/zlib/include -I/opt/hdf5/include > -I/opt/szip/include" > LDFLAGS="-L/opt/zlib/lib -L/opt/hdf5/lib -L/opt/szip/lib" > > configure script apparently ended ok, but there is an error in make check. > I send you the files out.configure and out.check You have encountered an error in the test program, nf_test/f90tst_vars2.f90, which only occurs when including the szip library. You can fix this by replacing that file with this one from netCDF-Fortran version 4.2: https://sub.unidata.ucar.edu/netcdf-fortran/tags/netcdf-fortran-4.2/nf_test/f90tst_vars2.f90 and rebuilding. Alternatively, you could build without the ability to read szip-compressed files. --Russ > Thanks, > > -- Fernando > > address@hidden> wrote: > > > Fernando, > > > > Those errors all indicate that the Fortran functions are > > not correctly calling the C functions. For released versions > > of the netCDF Fortran library, you sometimes have to specify > > the right C compiler flag when building the C library, so it > > will use the conventions expected by the Fortran compiler in C > > functions to be called by Fortran. The configure script can > > often determine this correctly, but not always. When it doesn't, > > you have to help by indicating the Fortran compiler that will be > > used when you are building the C library. > > > > It looks like you are using gfortran, so try reconfiguring and > > rebuilding the library, defining the environment variable > > > > CPPFLAGS=-DgFortran > > > > before running the configure script. > > > > If that doesn't work, please send us the config.out file resulting > > from running the configure script, as well as the complete output > > from "make check". > > > > --Russ > > > > > Hi, I ran "make check" and appear the following errors: > > > > > > First: all previous test are OK > > > Then: > > > ... > > > test_get.o: In function `test_nf_get_att_double_': > > > /opt/netcdf/nf_test/test_get.F:5511: undefined reference to `nf_open_' > > > /opt/netcdf/nf_test/test_get.F:5521: undefined reference to > > > `nf_get_att_double_' > > > /opt/netcdf/nf_test/test_get.F:5526: undefined reference to > > > `nf_get_att_double_' > > > /opt/netcdf/nf_test/test_get.F:5529: undefined reference to > > > `nf_get_att_double_' > > > /opt/netcdf/nf_test/test_get.F:5547: undefined reference to > > > `nf_get_att_double_' > > > /opt/netcdf/nf_test/test_get.F:5594: undefined reference to `nf_close_' > > > ... > > > > > > ../fortran/.libs/libnetcdff.so: undefined reference to > > `nf_def_var_endian_' > > > ../fortran/.libs/libnetcdff.so: undefined reference to > > > `nf_inq_compound_fieldname_' > > > ../fortran/.libs/libnetcdff.so: undefined reference to `nf_inq_typeid_' > > > ../fortran/.libs/libnetcdff.so: undefined reference to > > > `nf_def_var_chunking_' > > > ../fortran/.libs/libnetcdff.so: undefined reference to > > > `nf_inq_compound_fieldindex_' > > > ../fortran/.libs/libnetcdff.so: undefined reference to > > `nf_inq_var_deflate_' > > > ../fortran/.libs/libnetcdff.so: undefined reference to `nf__create_' > > > > > > ... > > > > > > ../fortran/.libs/libnetcdff.so: undefined reference to > > `nf_get_var1_int64_' > > > collect2: ld returned 1 exit status > > > make[2]: *** [nf_test] Error 1 > > > make[2]: Leaving directory `/opt/netcdf/nf_test' > > > make[1]: *** [check-am] Error 2 > > > make[1]: Leaving directory `/opt/netcdf/nf_test' > > > make: *** [check-recursive] Error 1 > > > > > > Thank for your help > > > > > > --Fernando > > > > > > > > > address@hidden> wrote: > > > > > > > > Hi, sorry for my delay response... > > > > > I need to install netcdf for ARW-WRF model > > > > > > > > > > When I try to compile the wrf model, There are some errorrs: > > > > > > > > > > ... > > > > > x=`echo "gfortran -w -ffree-form -ffree-line-length-none > > > > > -fconvert=big-endian -frecord-marker=4 " | awk '{print $1}'` ; > > export x > > > > ; \ > > > > > if [ $x = "gfortran" ] ; then \ > > > > > echo removing external declaration of iargc for gfortran ; \ > > > > > /lib/cpp -C -P -C -P -traditional -I/usr/local/netcdf/include > > > > > -I../ioapi_share diffwrf.F90 | sed '/integer *, *external.*iargc/d' > > > > > > diffwrf.f ;\ > > > > > else \ > > > > > /lib/cpp -C -P -C -P -traditional -I/usr/local/netcdf/include > > > > > -I../ioapi_share diffwrf.F90 > diffwrf.f ; \ > > > > > fi > > > > > removing external declaration of iargc for gfortran > > > > > gfortran -w -ffree-form -ffree-line-length-none -fconvert=big-endian > > > > > -frecord-marker=4 -c -I/usr/local/netcdf/include -I../ioapi_share > > > > > diffwrf.f > > > > > diffwrf io_netcdf is being built now. > > > > > wrf_io.o: In function `ext_ncd_get_var_info_': > > > > > wrf_io.f:(.text+0x1fe7): undefined reference to `nf_inq_varid_' > > > > > wrf_io.f:(.text+0x227d): undefined reference to `nf_inq_vartype_' > > > > > wrf_io.f:(.text+0x2720): undefined reference to `nf_get_att_int_' > > > > > wrf_io.f:(.text+0x307f): undefined reference to `nf_get_att_text_' > > > > > wrf_io.f:(.text+0x3361): undefined reference to `nf_inq_vardimid_' > > > > > wrf_io.f:(.text+0x33c8): undefined reference to `nf_inq_dimlen_' > > > > > wrf_io.f:(.text+0x341d): undefined reference to `nf_inq_dimlen_' > > > > > wrf_io.f:(.text+0x3481): undefined reference to `nf_inq_dimlen_' > > > > > ... > > > > > > > > > > /usr/local/netcdf/lib/libnetcdff.so: undefined reference to > > > > > `nf_get_varm_double_' > > > > > /usr/local/netcdf/lib/libnetcdff.so: undefined reference to > > > > > `nf_def_var_endian_' > > > > > /usr/local/netcdf/lib/libnetcdff.so: undefined reference to > > > > > `nf_inq_compound_fieldname_' > > > > > /usr/local/netcdf/lib/libnetcdff.so: undefined reference to > > > > `nf_inq_typeid_' > > > > > /usr/local/netcdf/lib/libnetcdff.so: undefined reference to > > > > > `nf_put_varm_int1_' > > > > > /usr/local/netcdf/lib/libnetcdff.so: undefined reference to > > > > > `nf_def_var_chunking_ > > > > > > > > > > .... > > > > > > > > > > Then I run command "find / -name libnetcdff.so" > > > > > /usr/local/netcdf/lib/libnetcdff.so > > > > > > > > > > > > > > > Any suggestions? > > > > > > > > You may want to ask the address@hidden mailing list, because the > > > > errors > > > > above have to do with how WRF links its programs to an installed netCDF > > > > library. > > > > If "make check" worked OK for the Fortran tests, then the library was > > built > > > > correctly. > > > > > > > > --Russ > > > > > > > > Russ Rew UCAR Unidata Program > > > > address@hidden http://www.unidata.ucar.edu > > > > > > > > > > > > > > > > Ticket Details > > > > =================== > > > > Ticket ID: NTO-571747 > > > > Department: Support netCDF > > > > Priority: Normal > > > > Status: Closed > > > > > > > > > > > > Russ Rew UCAR Unidata Program > > address@hidden http://www.unidata.ucar.edu > > > > > > > > Ticket Details > > =================== > > Ticket ID: NTO-571747 > > Department: Support netCDF > > Priority: Normal > > Status: Closed > > > > Russ Rew UCAR Unidata Program address@hidden http://www.unidata.ucar.edu Ticket Details =================== Ticket ID: NTO-571747 Department: Support netCDF Priority: Normal Status: Closed
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