> > Russ, > > Thank you for your help. It is working now. > > I tracked the problem down to -DgFortran. I had tried it before, and deleted > it > when it didn't work. Unfortunately I had entered it as '-Dgfortran'. Great, thanks for letting us know what worked! --Russ > Dennis > > On 2/19/2013 1:44 PM, Unidata netCDF Support wrote: > > Hi Dennis, > > > >> Package Version: netcdf-fortran-4.2 > >> Operating System: CentOS 5.8 > >> Hardware: > >> Description of problem: > >> > >> I have a problem getting nf_test in netcdf-fortran-4.2 to compile. > >> > >> My environment is: > >> > >> NETCDFHOME /usr/local/netcdf-4.2.1.1_intel_12 > >> CC mpicc > >> FC mpif90 > >> F90 mpif90 > >> F77 mpif90 > >> CXX mpiCC > >> CFLAGS '-O3 -fPIC -xHost -ip -no-prec-div -static-intel' > >> CXXFLAGS '-O3 -fPIC -xHost -ip -no-prec-div -static-intel' > >> FFLAGS '-O3 -fPIC -xHost -ip -no-prec-div -static-intel' > >> CPP 'icc -E' > >> CXXCPP 'icpc -E' > >> CPPFLAGS '-I/usr/local/netcdf-4.2.1.1_intel_12/include > >> -I/usr/local/hdf5-1.8.9_intel_12/include -I/usr/local/zlib-1.2.7_intel_12' > >> LDFLAGS '-L/usr/local/netcdf-4.2.1.1_intel_12/lib > >> -L/usr/local/hdf5-1.8.9_intel_12/lib > >> -L/usr/local/zlib-1.2.7_intel_12'http://svn.unidata.ucar.edu/repos/netcdf-fortran/trunk/ > >> LD_LIBRARY_PATH > >> /usr/local/netcdf-4.2.1.1_intel_12/lib:/usr/local/hdf5-1.8.9_intel_12/lib:/usr/local/zlib-1.2.7_intel_12:$LD_LIBRARY_PATH > >> setenv LIBS '-lnetcdf -lhdf5_hl -lhdf5 -lz' > >> setenv LDLIBS '-lnetcdf -lhdf5_hl -lhdf5 -lz' > >> > >> My configure is: > >> > >> configure --prefix=/usr/local/netcdf-4.2.1.1_intel_12 --enable-shared > >> --enable-static --enable-parallel-tests > >> > >> 'make' completes with no errors. > >> > >> A 'make check' fails at this point: > >> > >> ... > >> libtool: link: mpif90 -I../fortran -I../f90 -O3 -fPIC -xHost -ip > >> -no-prec-div -static-intel -o .libs/nf_test test_get.o test_put.o > >> nf_error.o nf_test.o test_read.o test_write.o util.o fortlib.o > >> -L/usr/local/netcdf-4.2.1.1_intel_12/lib > >> -L/usr/local/hdf5-1.8.9_intel_12/lib -L/usr/local/zlib-1.2.7_intel_12 > >> ../fortran/.libs/libnetcdff.so -L/usr/local/zlib-1.2.7/lib > >> /usr/local/netcdf-4.2.1.1_intel_12/lib/libnetcdf.so > >> /usr/local/hdf5-1.8.9_intel_12/lib/libhdf5_hl.so > >> /usr/local/hdf5-1.8.9_intel_12/lib/libhdf5.so -lrt -lm -lz -Wl,-rpath > >> -Wl,/usr/local/netcdf-4.2.1.1_intel_12/lib -Wl,-rpath > >> -Wl,/usr/local/hdf5-1.8.9_intel_12/lib > >> test_get.o: In function `test_nf_get_var1_text_': > >> test_get.F:(.text+0x31): undefined reference to `nf_open_' > >> test_get.F:(.text+0x108): undefined reference to `nf_get_var1_text_' > >> test_get.F:(.text+0x148): undefined reference to `nf_get_var1_text_' > >> test_get.F:(.text+0x1e0): undefined reference to `nf_get_var1_text_' > >> test_get.F:(.text+0x2f8): undefined reference to `nf_get_var1_text_' > >> test_get.F:(.text+0x365): undefined reference to `nf_close_' > >> ...etc... > >> > >> A 'nm fortran/.libs/libnetcdff.a | grep nf_open' shows: > >> > >> 0000000000000250 T nf_open__ > >> 0000000000000130 T nf_open_par__ > >> U nf_open_ > >> U nf_open_par_ > >> > >> What am I doing wrong? > > I'm not sure, but have two suggestions to try: > > > > 1. Add -DgFortran to your CPPFLAGS and run configure again > > 2. If that doesn't work, try our current netcdf-fortran test release at > > > > http://svn.unidata.ucar.edu/repos/netcdf-fortran/trunk/ > > > > which uses the standard F03 C-interoperability mechanisms to call C > > functions > > from Fortran, so doesn't need the underbar or double-underbar name mangling > > stuff currently in cfortran.h that only works for certain C and Fortran > > compiler > > combinations. If you try approach 2, you'll have to run > > > > autoreconf -i > > > > first to generate a configure script, which may entail installing the > > autoconf > > package, if you don't already have it. > > > > If one of these works, please let us know. > > > > --Russ > > > > Russ Rew UCAR Unidata Program > > address@hidden http://www.unidata.ucar.edu > > > > > > > > Ticket Details > > =================== > > Ticket ID: YTJ-181465 > > Department: Support netCDF > > Priority: Normal > > Status: Closed > > > > -- > Dennis Michael > Manager, High Productivity Technical Computing > Stanford Center for Computational Earth and Environmental Science (CEES) > School of Earth Sciences > Stanford University > 397 Panama Mall Mitchell Building room 415 > http://cees.stanford.edu/ > phone # (650) 723 2014 > > Russ Rew UCAR Unidata Program address@hidden http://www.unidata.ucar.edu Ticket Details =================== Ticket ID: YTJ-181465 Department: Support netCDF Priority: Normal Status: Closed
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