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[netCDF #HAD-852299]: Error with installation of netcdf-4.1.3 in ubuntu 11.0-64bit machine

Greetings!

Can you verify that libimf.so is on your system? Try the following command (or 
use the gnome search tool):

locate libimf.so

Cheers!

Sean

> Dear Sir I ran the command "make distclean" inside the directory
> "/netcdf-4.1.3" first and then tried to rebuild the Netcdf-4.1.3, still it
> is giving the error like below
> 
> libtool: link: /opt/intel/bin/icc -g -O2 -o .libs/tst_rename tst_rename.o
> ../liblib/.libs/libnetcdf.so -lm -Wl,-rpath -Wl,/home/dipak/NETCDF-4.1.3/lib
> ld: warning: libimf.so, needed by ../liblib/.libs/libnetcdf.so, not found
> (try using -rpath or -rpath-link)
> ld: warning: libsvml.so, needed by ../liblib/.libs/libnetcdf.so, not found
> (try using -rpath or -rpath-link)
> ld: warning: libintlc.so.5, needed by ../liblib/.libs/libnetcdf.so, not
> found (try using -rpath or -rpath-link)
> make[2]: Leaving directory `/home/dipak/netcdf-4.1.3/nctest'
> make  check-TESTS
> make[2]: Entering directory `/home/dipak/netcdf-4.1.3/nctest'
> /home/dipak/netcdf-4.1.3/nctest/.libs/lt-nctest: error while loading shared
> libraries: libimf.so: cannot open shared object file: No such file or
> directory
> FAIL: nctest
> /home/dipak/netcdf-4.1.3/nctest/.libs/lt-tst_rename: error while loading
> shared libraries: libimf.so: cannot open shared object file: No such file
> or directory
> FAIL: tst_rename
> cmp: nctest_classic.nc: No such file or directory
> FAIL: compare_test_files.sh
> ================================================
> 3 of 3 tests failed
> Please report to address@hidden
> ================================================
> make[2]: *** [check-TESTS] Error 1
> make[2]: Leaving directory `/home/dipak/netcdf-4.1.3/nctest'
> make[1]: *** [check-am] Error 2
> make[1]: Leaving directory `/home/dipak/netcdf-4.1.3/nctest'
> make: *** [check-recursive] Error 1
> dipak@ubuntu11:~/netcdf-4.1.3$
> 
> thanks and regards
> Dipak sahu
> 
> 
> address@hidden> wrote:
> 
> > Greetings!
> >
> > Did you run
> >
> > make distclean
> >
> > before you tried to rebuild?
> >
> > Sean
> >
> > > Dear sir
> > > >  I tried the below command command and try to install after that still
> > it
> > > > is giving the following errors
> > > >
> > >
> > > $source /opt/intel/bin/ifortvars.sh intel64
> > > $source /opt/intel/bin/iccvars.sh intel64
> > >
> > >
> > >
> > > >   /opt/intel/bin/icc -DHAVE_CONFIG_H -I. -I.. -I../fortran
> > > > -I../include     -g -O2 -MT                       tst_rename.o -MD -MP
> > -MF
> > > > $depbase.Tpo -c -o tst_rename.o tst_rename.c &&\
> > > >         mv -f $depbase.Tpo $depbase.Po
> > > >
> > > > /bin/bash ../libtool --tag=CC   --mode=link /opt/intel/bin/icc  -g -O2
> > > > ../liblib/libnetcdf.la                        -o tst_rename
> > tst_rename.o
> > > > -lm
> > > > libtool: link: /opt/intel/bin/icc -g -O2 -o .libs/tst_rename
> > tst_rename.o
> > > > ../liblib/.libs/lib                      netcdf.so -lm -Wl,-rpath
> > > > -Wl,/home/dipak/NETCDF-4.1.3/lib
> > > >
> > > > ld: warning: libimf.so, needed by ../liblib/.libs/libnetcdf.so, not
> > found
> > > > (try using -rpath or                       -rpath-link)
> > > > ld: warning: libsvml.so, needed by ../liblib/.libs/libnetcdf.so, not
> > found
> > > > (try using -rpath o                      r -rpath-link)
> > > > ld: warning: libintlc.so.5, needed by ../liblib/.libs/libnetcdf.so, not
> > > > found (try using -rpat                      h or -rpath-link)
> > > >
> > > > make[2]: Leaving directory `/home/dipak/netcdf-4.1.3/nctest'
> > > > make  check-TESTS
> > > > make[2]: Entering directory `/home/dipak/netcdf-4.1.3/nctest'
> > > > /home/dipak/netcdf-4.1.3/nctest/.libs/lt-nctest: error while loading
> > > > shared libraries: libimf.                      so: cannot open shared
> > > > object file: No such file or directory
> > > > FAIL: nctest
> > > > /home/dipak/netcdf-4.1.3/nctest/.libs/lt-tst_rename: error while
> > loading
> > > > shared libraries: lib                      imf.so: cannot open shared
> > > > object file: No such file or directory
> > > >
> > > > FAIL: tst_rename
> > > > cmp: nctest_classic.nc: No such file or directory
> > > > FAIL: compare_test_files.sh
> > > > ================================================
> > > > 3 of 3 tests failed
> > > > Please report to address@hidden
> > > > ================================================
> > > > make[2]: *** [check-TESTS] Error 1
> > > > make[2]: Leaving directory `/home/dipak/netcdf-4.1.3/nctest'
> > > > make[1]: *** [check-am] Error 2
> > > > make[1]: Leaving directory `/home/dipak/netcdf-4.1.3/nctest'
> > > > make: *** [check-recursive] Error 1
> > > > dipak@ubuntu11:~/netcdf-4.1.3$
> > > >
> > > >
> > > > Kindly help me in thsi regards, how to solve this error.
> > > >
> > > > thanks and regards
> > > >
> > > > Dipak kumar Sahu
> > > >
> > > >
> > > >
> > > >
> > > > address@hidden> wrote:
> > > >
> > > >> Greetings!
> > > >>
> > > >> The error indicates that netCDF is having a problem finding your Intel
> > > >> libraries. Did you source the Intel environmental variable setup
> > scripts
> > > >> for icc and ifort? If not, use the following command as a guide to
> > find the
> > > >> proper scripts on your system:
> > > >>
> > > >> source <location of Intel compiler>/bin/ifortvars.sh intel64
> > > >> source <location of Intel compiler>/bin/iccvars.sh intel64
> > > >>
> > > >> Cheers,
> > > >>
> > > >> Sean
> > > >>
> > > >> > Dear sir
> > > >> >
> > > >> > I am getting the following error while tring to instal netcdf-4.1.3
> > > >> > without HDF5 by using the following command
> > > >> >
> > > >> > ./configure --prefix=/home/dipak --disable-netcdf-4 make check
> > install
> > > >> >
> > > >> > The errors are like below
> > > >> >
> > > >> > /bin/bash ../libtool --tag=CC   --mode=link /opt/intel/bin/icc  -g
> > -O2
> > > >> > ../liblib/libnetcdf.la  -o tst_rename tst_rename.o  -lm
> > > >> >
> > > >> > libtool: link: /opt/intel/bin/icc -g -O2 -o .libs/tst_rename
> > > >> > tst_rename.o  ../liblib/.libs/libnetcdf.so
> > > >> > -lm -Wl,-rpath -Wl,//home/dipak/lib
> > > >> >
> > > >> > ld: warning: libimf.so, needed by ../liblib/.libs/libnetcdf.so, not
> > > >> found
> > > >> > (try using -rpath or -rpath-link)
> > > >> >
> > > >> > ld: warning: libsvml.so, needed by ../liblib/.libs/libnetcdf.so, not
> > > >> found
> > > >> > (try using -rpath or -rpath-link)
> > > >> >
> > > >> > ld: warning: libintlc.so.5, needed by ../liblib/.libs/libnetcdf.so,
> > not
> > > >> > found (try using -rpath or -rpath-link)
> > > >> >
> > > >> > make[2]: Leaving directory `/home/dipak/netcdf-4.1.3/nctest'
> > > >> >
> > > >> > make  check-TESTS
> > > >> >
> > > >> > make[2]: Entering directory `/home/dipak/netcdf-4.1.3/nctest'
> > > >> >
> > > >> > /home/dipak/netcdf-4.1.3/nctest/.libs/lt-nctest: error while loading
> > > >> shared
> > > >> > libraries: libimf.so: cannot open shared object file: No such file
> > or
> > > >> > directory
> > > >> >
> > > >> > FAIL: nctest
> > > >> >
> > > >> > /home/dipak/netcdf-4.1.3/nctest/.libs/lt-tst_rename: error while
> > loading
> > > >> > shared libraries: libimf.so: cannot open shared object file: No such
> > > >> file
> > > >> > or directory
> > > >> >
> > > >> > FAIL: tst_rename
> > > >> >
> > > >> > cmp: nctest_classic.nc: No such file or directory
> > > >> >
> > > >> > FAIL: compare_test_files.sh
> > > >> >
> > > >> > ================================================
> > > >> >
> > > >> > 3 of 3 tests failed
> > > >> >
> > > >> > Please report to address@hidden
> > > >> >
> > > >> > ================================================
> > > >> >
> > > >> > make[2]: *** [check-TESTS] Error 1
> > > >> >
> > > >> > make[2]: Leaving directory `/home/dipak/netcdf-4.1.3/nctest'
> > > >> >
> > > >> > make[1]: *** [check-am] Error 2
> > > >> >
> > > >> > make[1]: Leaving directory `/home/dipak/netcdf-4.1.3/nctest'
> > > >> >
> > > >> > make: *** [check-recursive] Error 1
> > > >> >
> > > >> > dipak@ubuntu11:~/netcdf-4.1.3$
> > > >> >
> > > >> > waiting for your kind reply
> > > >> > thanks and regards
> > > >> >
> > > >> > Dipak sahu
> > > >> >
> > > >> >
> > > >> > --
> > > >> > ********************************************
> > > >> > Dipak kumar Sahu,
> > > >> > Research Scholar,
> > > >> > Centre for Atmospheric Sciences.,
> > > >> > Indian Institute of Technology,Delhi
> > > >> > email:- address@hidden
> > > >> > **********************************************
> > > >> >
> > > >> >
> > > >>
> > > >>
> > > >> Ticket Details
> > > >> ===================
> > > >> Ticket ID: HAD-852299
> > > >> Department: Support netCDF
> > > >> Priority: Normal
> > > >> Status: Open
> > > >>
> > > >>
> > > >
> > > >
> > > > --
> > > > ********************************************
> > > > Dipak kumar Sahu,
> > > > Research Scholar,
> > > > Centre for Atmospheric Sciences.,
> > > > Indian Institute of Technology,Delhi
> > > > email:- address@hidden
> > > > **********************************************
> > > >
> > >
> > >
> > >
> > > --
> > > ********************************************
> > > Dipak kumar Sahu,
> > > Research Scholar,
> > > Centre for Atmospheric Sciences.,
> > > Indian Institute of Technology,Delhi
> > > email:- address@hidden
> > > **********************************************
> > >
> > >
> >
> >
> > Ticket Details
> > ===================
> > Ticket ID: HAD-852299
> > Department: Support netCDF
> > Priority: Normal
> > Status: Open
> >
> >
> 
> 
> --
> ********************************************
> Dipak kumar Sahu,
> Research Scholar,
> Centre for Atmospheric Sciences.,
> Indian Institute of Technology,Delhi
> email:- address@hidden
> **********************************************
> 
> 


Ticket Details
===================
Ticket ID: HAD-852299
Department: Support netCDF
Priority: Normal
Status: Open