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[netCDF #YAK-227068]: Problems building netcdf-4.1.3
- Subject: [netCDF #YAK-227068]: Problems building netcdf-4.1.3
- Date: Tue, 09 Aug 2011 13:07:18 -0600
Greetings Shrinivas,
The Intel compilers come with a few shell scripts that will setup the proper
environmental variables that are needed to successfully compile with ifort and
icc. The scripts are called ifortvars.sh and iccvars.sh (.csh for c shells),
and should be located in <path to intel compiler>/bin (for example,
/opt/intel/fce/10.1.006/bin/). Did you source these? If not, run the scrips
first and then try to build again (don't forget to do a `make distclean`
first). If you did source those scripts, please send me your config log (inside
the netCDF build directory) and the make log (you can capture this by doing
`make >& make.log`).
Cheers!
Sean
> Hello,
> I am trying to build netcdf version 4.1.3 on ORNL cray computer named
> gaea using intel compiler
> and it is not working. I am attaching the output from my attempt here.
> Any suggestion would be
> much appreciated.
> Thanks
> Shrinivas Moorthi
>
> --
> *************************************************************************
> Dr. Shrinivas Moorthi
>
> Global Climate and Weather Modeling Branch
> EMC/NCEP
> W/NP23, Room 207, NOAA Science Center
> 5200 Auth Road, Camp Springs MD 20746-4304 USA
>
> e-mail: address@hidden
> Phone: (301) 763-8000 X 7233 Fax: (301) 763-8545
> *************************************************************************
>
>
> + pwd
> + currdir=/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf
> + cd /lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3
> + CC=cc
> + export CC
> + CPPFLAGS=-DNDEBUG
> + export CPPFLAGS
> + CFLAGS=-O
> + export CFLAGS
> + FC=ftn
> + export FC
> + FFLAGS=-O
> + export FFLAGS
> + FFLAGS='-xHOST -convert big_endian -FR'
> + export FFLAGS
> + FCFLAGS='-xHOST -convert big_endian -FR'
> + export FCFLAGS
> + CXX=/usr/bin/c++
> + export CXX
> + CXXFLAGS=-O
> + export CXXFLAGS
> + ARFLAGS=-rv
> + export ARFLAGS
> + NMFLAGS=''
> + export NMFLAGS
> + LD_LIBRARY_PATH=/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf/lib
> + export LD_LIBRARY_PATH
> + make distclean
> Making distclean in libcf
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libcf'
> Making distclean in doc
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libcf/doc'
> test -z "libcf.dvi libcf.pdf libcf.ps libcf.html" \
> || rm -rf libcf.dvi libcf.pdf libcf.ps libcf.html
> rm -rf .libs _libs
> rm -rf libcf.aux libcf.cp libcf.cps libcf.fn libcf.ky libcf.kys libcf.log \
> libcf.pg libcf.pgs libcf.tmp libcf.toc libcf.tp libcf.tps \
> libcf.vr
> rm -f *.lo
> rm -f vti.tmp
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libcf/doc'
> Making distclean in cfcheck
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libcf/cfcheck'
> rm -f cfcheck
> test -z "useage.txt" || rm -f useage.txt
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libcf/cfcheck'
> Making distclean in src
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libcf/src'
> rm -f tst_coords tst_files tst_vars tst_cvars tst_vert tst_subsets
> test -z "libcf.mod tst_coords_classic.nc tst_coords_64bit.nc
> tst_coords_netcdf4_classic.nc tst_coords_netcdf4.nc tst_vars.nc tst_files.nc
> tst_cvars.nc tst_vert_sigma.nc tst_vert_hybrid_sigma.nc
> tst_subsets_simple_sigma.nc tst_subsets_nw.nc tst_subsets_sw.nc
> tst_subsets_se.nc tst_subsets_ne.nc tst_f03_file.nc" || rm -f libcf.mod
> tst_coords_classic.nc tst_coords_64bit.nc tst_coords_netcdf4_classic.nc
> tst_coords_netcdf4.nc tst_vars.nc tst_files.nc tst_cvars.nc tst_vert_sigma.nc
> tst_vert_hybrid_sigma.nc tst_subsets_simple_sigma.nc tst_subsets_nw.nc
> tst_subsets_sw.nc tst_subsets_se.nc tst_subsets_ne.nc tst_f03_file.nc
> test -z "libcf.la" || rm -f libcf.la
> rm -f "./so_locations"
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libcf/src'
> Making distclean in .
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libcf'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "gridspec/tools/make_hgrid/run_tests
> gridspec/tools/make_vgrid/run_tests gridspec/tools/make_topog/run_tests" ||
> rm -f gridspec/tools/make_hgrid/run_tests gridspec/tools/make_vgrid/run_tests
> gridspec/tools/make_topog/run_tests
> test . = "." || test -z "" || rm -f
> rm -f config.h stamp-h1 nfconfig.inc stamp-h2
> rm -f libtool config.lt
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libcf'
> rm -f config.status config.cache config.log configure.lineno
> config.status.lineno
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libcf'
> Making distclean in examples
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples'
> Making distclean in CXX4
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples/CXX4'
> rm -f simple_xy_wr sfc_pres_temp_wr pres_temp_4D_wr pres_temp_4D_rd
> simple_xy_rd sfc_pres_temp_rd simple_xy_wr_formats
> test -z "simple_xy.nc sfc_pres_temp.nc pres_temp_4D.nc tmp-test.cdl
> tmp-ref.cdl simple_xy_classic.nc simple_xy_classic64.nc simple_xy_nc4.nc
> simple_xy_nc4cm.nc" || rm -f simple_xy.nc sfc_pres_temp.nc pres_temp_4D.nc
> tmp-test.cdl tmp-ref.cdl simple_xy_classic.nc simple_xy_classic64.nc
> simple_xy_nc4.nc simple_xy_nc4cm.nc
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples/CXX4'
> Making distclean in CXX
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples/CXX'
> rm -f simple_xy_wr simple_xy_rd sfc_pres_temp_wr sfc_pres_temp_rd
> pres_temp_4D_wr pres_temp_4D_rd
> test -z "simple_xy.nc sfc_pres_temp.nc pres_temp_4D.nc" || rm -f simple_xy.nc
> sfc_pres_temp.nc pres_temp_4D.nc
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples/CXX'
> Making distclean in F90
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples/F90'
> rm -f simple_xy_wr simple_xy_rd sfc_pres_temp_wr sfc_pres_temp_rd
> pres_temp_4D_wr pres_temp_4D_rd
> test -z "simple_xy.nc sfc_pres_temp.nc pres_temp_4D.nc " || rm -f
> simple_xy.nc sfc_pres_temp.nc pres_temp_4D.nc
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples/F90'
> Making distclean in F77
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples/F77'
> rm -f simple_xy_wr simple_xy_rd sfc_pres_temp_wr sfc_pres_temp_rd
> pres_temp_4D_wr pres_temp_4D_rd
> test -z "simple_xy.nc sfc_pres_temp.nc pres_temp_4D.nc simple_xy_nc4.nc" ||
> rm -f simple_xy.nc sfc_pres_temp.nc pres_temp_4D.nc simple_xy_nc4.nc
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples/F77'
> Making distclean in CDL
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples/CDL'
> test -z "simple_xy.nc sfc_pres_temp.nc pres_temp_4D.nc" || rm -f simple_xy.nc
> sfc_pres_temp.nc pres_temp_4D.nc
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples/CDL'
> Making distclean in C
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples/C'
> rm -f simple_xy_wr simple_xy_rd sfc_pres_temp_wr sfc_pres_temp_rd
> pres_temp_4D_wr pres_temp_4D_rd
> test -z "sfc_pres_temp.nc simple_xy.nc pres_temp_4D.nc simple_nc4.nc
> simple_xy_nc4.nc" || rm -f sfc_pres_temp.nc simple_xy.nc pres_temp_4D.nc
> simple_nc4.nc simple_xy_nc4.nc
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples/C'
> Making distclean in .
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples'
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/examples'
> Making distclean in man4
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/man4'
> test -z "netcdf.dvi netcdf.pdf netcdf.ps netcdf.html netcdf-install.dvi \
> netcdf-install.pdf netcdf-install.ps netcdf-install.html \
> netcdf-c.dvi netcdf-c.pdf netcdf-c.ps netcdf-c.html \
> netcdf-f77.dvi netcdf-f77.pdf netcdf-f77.ps netcdf-f77.html \
> netcdf-f90.dvi netcdf-f90.pdf netcdf-f90.ps netcdf-f90.html \
> netcdf-cxx.dvi netcdf-cxx.pdf netcdf-cxx.ps netcdf-cxx.html \
> netcdf-tutorial.dvi netcdf-tutorial.pdf netcdf-tutorial.ps \
> netcdf-tutorial.html" \
> || rm -rf netcdf.dvi netcdf.pdf netcdf.ps netcdf.html netcdf-install.dvi \
> netcdf-install.pdf netcdf-install.ps netcdf-install.html \
> netcdf-c.dvi netcdf-c.pdf netcdf-c.ps netcdf-c.html \
> netcdf-f77.dvi netcdf-f77.pdf netcdf-f77.ps netcdf-f77.html \
> netcdf-f90.dvi netcdf-f90.pdf netcdf-f90.ps netcdf-f90.html \
> netcdf-cxx.dvi netcdf-cxx.pdf netcdf-cxx.ps netcdf-cxx.html \
> netcdf-tutorial.dvi netcdf-tutorial.pdf netcdf-tutorial.ps \
> netcdf-tutorial.html
> rm -rf .libs _libs
> rm -f 1.tmp
> rm -f 2.tmp
> rm -f 3.tmp
> rm -f 4.tmp
> rm -f 5.tmp
> rm -f 6.tmp
> rm -rf netcdf.aux netcdf.cp netcdf.cps netcdf.fn netcdf.ky netcdf.kys \
> netcdf.log netcdf.pg netcdf.pgs netcdf.tmp netcdf.toc \
> netcdf.tp netcdf.tps netcdf.vr netcdf-install.aux \
> netcdf-install.cp netcdf-install.cps netcdf-install.fn \
> netcdf-install.ky netcdf-install.kys netcdf-install.log \
> netcdf-install.pg netcdf-install.pgs netcdf-install.tmp \
> netcdf-install.toc netcdf-install.tp netcdf-install.tps \
> netcdf-install.vr netcdf-c.aux netcdf-c.cp netcdf-c.cps \
> netcdf-c.fn netcdf-c.ky netcdf-c.kys netcdf-c.log \
> netcdf-c.pg netcdf-c.pgs netcdf-c.tmp netcdf-c.toc \
> netcdf-c.tp netcdf-c.tps netcdf-c.vr netcdf-f77.aux \
> netcdf-f77.cp netcdf-f77.cps netcdf-f77.fn netcdf-f77.ky \
> netcdf-f77.kys netcdf-f77.log netcdf-f77.pg netcdf-f77.pgs \
> netcdf-f77.tmp netcdf-f77.toc netcdf-f77.tp netcdf-f77.tps \
> netcdf-f77.vr netcdf-f90.aux netcdf-f90.cp netcdf-f90.cps \
> netcdf-f90.fn netcdf-f90.ky netcdf-f90.kys netcdf-f90.log \
> netcdf-f90.pg netcdf-f90.pgs netcdf-f90.tmp netcdf-f90.toc \
> netcdf-f90.tp netcdf-f90.tps netcdf-f90.vr netcdf-cxx.aux \
> netcdf-cxx.cp netcdf-cxx.cps netcdf-cxx.fn netcdf-cxx.ky \
> netcdf-cxx.kys netcdf-cxx.log netcdf-cxx.pg netcdf-cxx.pgs \
> netcdf-cxx.tmp netcdf-cxx.toc netcdf-cxx.tp netcdf-cxx.tps \
> netcdf-cxx.vr netcdf-tutorial.aux netcdf-tutorial.cp \
> netcdf-tutorial.cps netcdf-tutorial.fn netcdf-tutorial.ky \
> netcdf-tutorial.kys netcdf-tutorial.log netcdf-tutorial.pg \
> netcdf-tutorial.pgs netcdf-tutorial.tmp netcdf-tutorial.toc \
> netcdf-tutorial.tp netcdf-tutorial.tps netcdf-tutorial.vr
> rm -f *.lo
> rm -f vti.tmp
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/man4'
> Making distclean in ncdap_test
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdap_test'
> Making distclean in expectremote4
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdap_test/expectremote4'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdap_test/expectremote4'
> Making distclean in expectremote3
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdap_test/expectremote3'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdap_test/expectremote3'
> Making distclean in expected4
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdap_test/expected4'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdap_test/expected4'
> Making distclean in expected3
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdap_test/expected3'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdap_test/expected3'
> Making distclean in testdata3
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdap_test/testdata3'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdap_test/testdata3'
> Making distclean in .
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdap_test'
> rm -f
> test -z "test_varm3 test_cvt3 results/*.dmp results/*.das results/*.dds
> datadds* t_dap3a " || rm -f test_varm3 test_cvt3 results/*.dmp results/*.das
> results/*.dds datadds* t_dap3a
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> test -z ".dodsrc" || rm -f .dodsrc
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdap_test'
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdap_test'
> Making distclean in nc_test4
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nc_test4'
> rm -f tst_dims tst_dims2 tst_dims3 tst_files tst_files4 tst_vars tst_varms
> tst_unlim_vars tst_converts tst_converts2 tst_grps tst_grps2 tst_compounds
> tst_compounds2 tst_compounds3 tst_opaques tst_strings tst_strings2
> tst_interops tst_interops4 tst_interops5 tst_interops6 tst_enums tst_coords
> tst_coords2 tst_coords3 tst_vars3 tst_vars4 tst_chunks tst_chunks2 tst_utf8
> tst_fills tst_fills2 tst_fillbug tst_xplatform tst_xplatform2 tst_h_atts2
> tst_endian_fill tst_atts t_type cdm_sea_soundings tst_camrun tst_vl tst_atts1
> tst_atts2 tst_vars2 tst_files5 tst_files6 tst_sync tst_v2
> test -z "tst_mpi_parallel.bin cdm_sea_soundings.nc bm_chunking.nc bm_radar.nc
> bm_radar1.nc radar_3d_compression_test.txt radar_3d_compression.txt
> radar_2d_compression.txt radar_3d_chunking.txt tst_floats_1D.cdl
> floats_1D_3.nc floats_1D.cdl tst_*.nc tst_floats2_*.cdl tst_ints2_*.cdl
> tst_shorts2_*.cdl tst_elena_*.cdl tst_simple*.cdl tst_chunks.cdl pr_A1.*
> tauu_A1.* usi_01.* thetau_01.* tst_*.nc tst_*.h5" || rm -f
> tst_mpi_parallel.bin cdm_sea_soundings.nc bm_chunking.nc bm_radar.nc
> bm_radar1.nc radar_3d_compression_test.txt radar_3d_compression.txt
> radar_2d_compression.txt radar_3d_chunking.txt tst_floats_1D.cdl
> floats_1D_3.nc floats_1D.cdl tst_*.nc tst_floats2_*.cdl tst_ints2_*.cdl
> tst_shorts2_*.cdl tst_elena_*.cdl tst_simple*.cdl tst_chunks.cdl pr_A1.*
> tauu_A1.* usi_01.* thetau_01.* tst_*.nc tst_*.h5
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nc_test4'
> Making distclean in cxx4
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/cxx4'
> rm -f test_group test_dim test_att test_var test_var2 test_type
> test -z "firstFile.cdf" || rm -f firstFile.cdf
> test -z "libnetcdf_c++4.la" || rm -f libnetcdf_c++4.la
> rm -f "./so_locations"
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/cxx4'
> Making distclean in cxx
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/cxx'
> rm -f nctst tst_failure
> test -z "nctst_classic.nc nctst_64bit_offset.nc nctst_netcdf4.nc
> nctst_netcdf4_classic.nc nctst_classic.cdl nctst_64bit_offset.cdl tst_*.nc "
> || rm -f nctst_classic.nc nctst_64bit_offset.nc nctst_netcdf4.nc
> nctst_netcdf4_classic.nc nctst_classic.cdl nctst_64bit_offset.cdl tst_*.nc
> test -z "libnetcdf_c++.la" || rm -f libnetcdf_c++.la
> rm -f "./so_locations"
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/cxx'
> Making distclean in nf_test
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nf_test'
> rm -f nf_test tst_f77_v2 ftest
> test -z "scratch.nc test.nc copy.nc fills.nc tst_*.nc ftst_*.nc f90tst_*.nc"
> || rm -f scratch.nc test.nc copy.nc fills.nc tst_*.nc ftst_*.nc f90tst_*.nc
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nf_test'
> Making distclean in ncdump
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdump'
> Making distclean in expected4
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdump/expected4'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdump/expected4'
> Making distclean in cdl4
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdump/cdl4'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdump/cdl4'
> Making distclean in .
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdump'
> rm -f ncdump nccopy
> rm -f rewrite-scalar ctest ctest64 ncdump tst_utf8
> test -z "test0.nc test1.cdl test1.nc test2.cdl ctest1.cdl ctest.c ctest64.c
> ctest0.nc ctest0_64.nc c1.cdl ctest1_64.cdl c0.nc small.nc small2.nc c0tmp.nc
> c1.ncml utf8.cdl utf8_64.cdl utf8.nc utf8_64.nc tmp.cdl tst_vlen_data.nc
> tst_utf8.nc tst_special_atts.nc tst_unicode.nc tst_solar_2.nc
> tst_string_data.nc tst_calendars.nc tst_nans.nc tst_opaque_data.nc
> tst_solar_cmp.nc tst_enum_data.nc tst_solar_1.nc tst_mslp_64.nc tst_mslp.nc
> tst_comp2.nc tst_ncml.nc tst_fillbug.nc tst_group_data.nc tst_small.nc
> tst_comp.nc tst_unicode.cdl tst_group_data.cdl tst_compounds2.cdl
> tst_comp.cdl tst_enum_data.cdl tst_small.cdl tst_times.cdl tst_solar_2.cdl
> tst_string_data.cdl tst_fillbug.cdl tst_opaque_data.cdl tst_compounds4.cdl
> tst_utf8.cdl tst_compounds3.cdl tst_special_atts.cdl tst_nans.cdl
> tst_format_att_64.cdl tst_vlen_data.cdl tst_solar_1.cdl tst_format_att.cdl
> tst_inflated.nc tst_deflated.nc tst_chunking.nc tmp*.nc results/*.nc
> results/*.dmp results/*.dmp2 tmp*.cdl" || rm -f test0.nc te
st1.cdl test1.nc test2.cdl ctest1.cdl ctest.c ctest64.c ctest0.nc ctest0_64.nc
c1.cdl ctest1_64.cdl c0.nc small.nc small2.nc c0tmp.nc c1.ncml utf8.cdl
utf8_64.cdl utf8.nc utf8_64.nc tmp.cdl tst_vlen_data.nc tst_utf8.nc
tst_special_atts.nc tst_unicode.nc tst_solar_2.nc tst_string_data.nc
tst_calendars.nc tst_nans.nc tst_opaque_data.nc tst_solar_cmp.nc
tst_enum_data.nc tst_solar_1.nc tst_mslp_64.nc tst_mslp.nc tst_comp2.nc
tst_ncml.nc tst_fillbug.nc tst_group_data.nc tst_small.nc tst_comp.nc
tst_unicode.cdl tst_group_data.cdl tst_compounds2.cdl tst_comp.cdl
tst_enum_data.cdl tst_small.cdl tst_times.cdl tst_solar_2.cdl
tst_string_data.cdl tst_fillbug.cdl tst_opaque_data.cdl tst_compounds4.cdl
tst_utf8.cdl tst_compounds3.cdl tst_special_atts.cdl tst_nans.cdl
tst_format_att_64.cdl tst_vlen_data.cdl tst_solar_1.cdl tst_format_att.cdl
tst_inflated.nc tst_deflated.nc tst_chunking.nc tmp*.nc results/*.nc
results/*.dmp results/*.dmp2 tmp*.cdl
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdump'
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncdump'
> Making distclean in ncgen
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncgen'
> rm -f ncgen
> test -z "c0.nc c0_64.nc c0_4.nc c0_4c.nc ref_camrun.c" || rm -f c0.nc
> c0_64.nc c0_4.nc c0_4c.nc ref_camrun.c
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncgen'
> Making distclean in ncgen3
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncgen3'
> rm -f ncgen3
> test -z "c0.nc c0_64.nc c0_4.nc c0_4c.nc" || rm -f c0.nc c0_64.nc c0_4.nc
> c0_4c.nc
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncgen3'
> Making distclean in fortran
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/fortran'
> test -z "nfconfig1.inc netcdf.inc" || rm -f nfconfig1.inc netcdf.inc
> test -z "libnetcdff.la" || rm -f libnetcdff.la
> rm -f "./so_locations"
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> test -z "nfconfig.inc " || rm -f nfconfig.inc
> rm -f nfconfig1.inc stamp-h2
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/fortran'
> Making distclean in f90
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/f90'
> test -z "typesizes.mod netcdf.mod " || rm -f typesizes.mod netcdf.mod
> rm -rf .libs _libs
> test -z "libnetcdff90.la" || rm -f libnetcdff90.la
> rm -f "./so_locations"
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/f90'
> Making distclean in nc_test
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nc_test'
> rm -f t_nc tst_small nc_test tst_misc tst_norm tst_names tst_nofill
> tst_nofill2 tst_nofill3
> test -z "nc_test_classic.nc nc_test_64bit.nc nc_test_netcdf4.nc tst_*.nc
> t_nc.nc large_files.nc quick_large_files.nc " || rm -f nc_test_classic.nc
> nc_test_64bit.nc nc_test_netcdf4.nc tst_*.nc t_nc.nc large_files.nc
> quick_large_files.nc
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nc_test'
> Making distclean in nctest
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nctest'
> rm -f nctest tst_rename
> test -z "nctest_classic.nc nctest_64bit_offset.nc nctest_netcdf4.nc test2.nc
> temp.tmp tst_*.nc" || rm -f nctest_classic.nc nctest_64bit_offset.nc
> nctest_netcdf4.nc test2.nc temp.tmp tst_*.nc
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nctest'
> Making distclean in liblib
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/liblib'
> test -z "libnetcdf.la" || rm -f libnetcdf.la
> rm -f "./so_locations"
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/liblib'
> Making distclean in libcdmr
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libcdmr'
> test -z "" || rm -f
> rm -rf .libs _libs
> test -z "" || rm -f
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libcdmr'
> Making distclean in libdap2
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libdap2'
> test -z "" || rm -f
> rm -rf .libs _libs
> test -z "" || rm -f
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libdap2'
> Making distclean in libsrc4
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libsrc4'
> rm -rf .libs _libs
> test -z "libnetcdf4.la" || rm -f libnetcdf4.la
> rm -f "./so_locations"
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libsrc4'
> Making distclean in libsrc
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libsrc'
> rm -rf .libs _libs
> test -z "libnetcdf3.la" || rm -f libnetcdf3.la
> rm -f "./so_locations"
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libsrc'
> Making distclean in oc
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/oc'
> rm -rf .libs _libs
> test -z "" || rm -f
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/oc'
> Making distclean in libdispatch
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libdispatch'
> rm -rf .libs _libs
> test -z "libdispatch.la libnetcdf2.la " || rm -f libdispatch.la libnetcdf2.la
> rm -f "./so_locations"
> rm -f "./so_locations"
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libdispatch'
> Making distclean in h5_test
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/h5_test'
> rm -f tst_h_files tst_h_files2 tst_h_files4 tst_h_atts tst_h_atts3
> tst_h_atts4 tst_h_vars tst_h_vars2 tst_h_vars3 tst_h_grps tst_h_compounds
> tst_h_compounds2 tst_h_wrt_cmp tst_h_rd_cmp tst_h_vl tst_h_opaques
> tst_h_strings tst_h_strings1 tst_h_strings2 tst_h_ints tst_h_dimscales
> tst_h_dimscales1 tst_h_dimscales2 tst_h_dimscales3 tst_h_enums
> tst_h_dimscales4
> test -z "tst_h_*.h5" || rm -f tst_h_*.h5
> rm -rf .libs _libs
> rm -f *.o
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/h5_test'
> Making distclean in udunits
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/udunits'
> Making distclean in test
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/udunits/test'
> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/udunits/test'
> Making distclean in prog
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/udunits/prog'
> test -z "udunits2prog.dvi udunits2prog.pdf udunits2prog.ps udunits2prog.html"
> \
> || rm -rf udunits2prog.dvi udunits2prog.pdf udunits2prog.ps udunits2prog.html
> rm -f udunits2
> rm -rf .libs _libs
> rm -rf udunits2prog.aux udunits2prog.cp udunits2prog.cps udunits2prog.fn \
> udunits2prog.fns udunits2prog.ky udunits2prog.kys \
> udunits2prog.log udunits2prog.pg udunits2prog.pgs \
> udunits2prog.tmp udunits2prog.toc udunits2prog.tp \
> udunits2prog.tps udunits2prog.vr udunits2prog.vrs
> rm -f *.o
> test -z "lint.log *.ln" || rm -f lint.log *.ln
> rm -f *.lo
> rm -f *.tab.c
> test -z "" || rm -f
> test . = "." || test -z "" || rm -f
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> rm -rf ./.deps
> rm -f Makefile
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/udunits/prog'
> Making distclean in lib
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/udunits/lib'
> Making distclean in xmlSuccesses
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> Making distclean in xmlFailures
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> Making distclean in .
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> test -z "udunits2lib.dvi udunits2lib.pdf udunits2lib.ps udunits2lib.html" \
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> udunits2lib.ky udunits2lib.kys udunits2lib.log \
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> rm -f *.o
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> Making distclean in expat
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> Making distclean in .
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> test -z "udunits2.dvi udunits2.pdf udunits2.ps udunits2.html" \
> || rm -rf udunits2.dvi udunits2.pdf udunits2.ps udunits2.html
> rm -rf .libs _libs
> rm -rf udunits2.aux udunits2.cp udunits2.cps udunits2.fn udunits2.fns \
> udunits2.ky udunits2.kys udunits2.log udunits2.pg \
> udunits2.pgs udunits2.tmp udunits2.toc udunits2.tp \
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> rm -f *.lo
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> test -z "" || rm -f
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> rm -f config.h stamp-h1
> rm -f libtool config.lt
> rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
> make[2]: Leaving directory
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> rm -f Makefile
> make[1]: Leaving directory
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> Making distclean in include
> make[1]: Entering directory
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> rm -rf .libs _libs
> rm -f *.lo
> test -z "" || rm -f
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> rm -f *.lo
> test -z "nc-config netcdf.pc" || rm -f nc-config netcdf.pc
> test . = "." || test -z "" || rm -f
> test -z "VERSION comps.txt test_prog" || rm -f VERSION comps.txt test_prog
> rm -f config.h stamp-h1
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> rm -f config.status config.cache config.log configure.lineno
> config.status.lineno
> rm -f Makefile
> + ./configure --prefix
> /lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf --disable-netcdf-4
> --disable-f77
> configure: netCDF 4.1.3
> checking build system type... x86_64-unknown-linux-gnu
> checking host system type... x86_64-unknown-linux-gnu
> checking target system type... x86_64-unknown-linux-gnu
> checking for a BSD-compatible install... /usr/bin/install -c
> checking whether build environment is sane... yes
> checking for a thread-safe mkdir -p... /bin/mkdir -p
> checking for gawk... gawk
> checking whether make sets $(MAKE)... yes
> configure: checking user options
> checking whether CXX is set to ''... no
> checking whether FC is set to ''... no
> checking whether F90 is set to ''... no
> checking whether a NCIO_MINBLOCKSIZE was specified... 256
> checking whether udunits is to be built... no
> checking if fsync support is enabled... yes
> checking whether extra valgrind tests should be run... no
> checking whether we should try to build netCDF-4... no
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> checking whether reading of HDF4 SD files is to be enabled... no
> checking whether to fetch some sample HDF4 files from Unidata ftp site to
> test HDF4 reading (requires wget)... no
> checking whether parallel I/O for classic and 64-bit offset files using
> parallel-netcdf is to be enabled... no
> checking whether new netCDF-4 C++ API is to be built... no
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> 67108864
> checking whether a number of chunks for the default per-variable cache was
> specified... 10
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> specified... 1009
> checking whether a default cache preemption for HDF5 was specified... 0.75
> checking whether netCDF-4 logging is enabled... no
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> checking whether DAP client is to be built... yes
> checking for style of include used by make... GNU
> checking for gcc... cc
> checking whether the C compiler works... yes
> checking for C compiler default output file name... a.out
> checking for suffix of executables...
> checking whether we are cross compiling... no
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... yes
> checking whether cc accepts -g... yes
> checking for cc option to accept ISO C89... none needed
> checking dependency style of cc... gcc3
> checking for curl_easy_setopt in -lcurl... no
> configure: libcurl not found; disabling dap and cdmremote support
> checking whether dap remote testing should be enabled (default on)... no
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> off)... no
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> checking whether the ncgen/ncdump/nccopy should be built... yes
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> checking whether extreme numbers should be used in tests... yes
> checking where to put large temp files if large file tests are run... .
> checking whether a win32 DLL is desired... no
> configure: finding C compiler
> checking for gcc... (cached) cc
> checking whether we are using the GNU C compiler... (cached) yes
> checking whether cc accepts -g... (cached) yes
> checking for cc option to accept ISO C89... (cached) none needed
> checking dependency style of cc... (cached) gcc3
> checking whether cc understands -c and -o together... yes
> checking for an ANSI C-conforming const... yes
> checking whether a CURLOPT_KEYPASSWD is defined... yes
> configure: finding Fortran compiler (will not be used if Fortran API is not
> desired)
> checking whether we are using the GNU Fortran compiler... no
> checking whether ftn accepts -g... yes
> checking whether we are using the GNU Fortran 77 compiler... no
> checking whether ftn accepts -g... yes
> configure: finding C++ compiler (will not be used if C++ API is not desired)
> checking whether we are using the GNU C++ compiler... yes
> checking whether /usr/bin/c++ accepts -g... yes
> checking dependency style of /usr/bin/c++... gcc3
> configure: setting up libtool
> checking how to print strings... printf
> checking for a sed that does not truncate output... /usr/bin/sed
> checking for grep that handles long lines and -e... /usr/bin/grep
> checking for egrep... /usr/bin/grep -E
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> checking for ld used by cc... /usr/bin/ld
> checking if the linker (/usr/bin/ld) is GNU ld... yes
> checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
> checking the name lister (/usr/bin/nm -B) interface... BSD nm
> checking whether ln -s works... yes
> checking the maximum length of command line arguments... 1572864
> checking whether the shell understands some XSI constructs... yes
> checking whether the shell understands "+="... yes
> checking how to convert x86_64-unknown-linux-gnu file names to
> x86_64-unknown-linux-gnu format... func_convert_file_noop
> checking how to convert x86_64-unknown-linux-gnu file names to toolchain
> format... func_convert_file_noop
> checking for /usr/bin/ld option to reload object files... -r
> checking for objdump... objdump
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> checking for dlltool... no
> checking how to associate runtime and link libraries... printf %s\n
> checking for ar... ar
> checking for archiver @FILE support... @
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> checking for ranlib... ranlib
> checking command to parse /usr/bin/nm -B output from cc object... ok
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> checking if mt is a manifest tool... no
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> checking for ANSI C header files... yes
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> checking for objdir... .libs
> checking if cc supports -fno-rtti -fno-exceptions... yes
> checking for cc option to produce PIC... -fPIC -DPIC
> checking if cc PIC flag -fPIC -DPIC works... yes
> checking if cc static flag -static works... yes
> checking if cc supports -c -o file.o... yes
> checking if cc supports -c -o file.o... (cached) yes
> checking whether the cc linker (/usr/bin/ld -m elf_x86_64) supports shared
> libraries... yes
> checking whether -lc should be explicitly linked in... no
> checking dynamic linker characteristics... icc: warning #10314: specifying
> -lm before object files may supercede the Intel(R) math library and affect
> performance
> GNU/Linux ld.so
> checking how to hardcode library paths into programs... immediate
> checking whether stripping libraries is possible... yes
> checking if libtool supports shared libraries... yes
> checking whether to build shared libraries... yes
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> checking how to run the C++ preprocessor... /usr/bin/c++ -E
> checking for ld used by /usr/bin/c++... /usr/bin/ld -m elf_x86_64
> checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes
> checking whether the /usr/bin/c++ linker (/usr/bin/ld -m elf_x86_64) supports
> shared libraries... yes
> checking for /usr/bin/c++ option to produce PIC... -fPIC -DPIC
> checking if /usr/bin/c++ PIC flag -fPIC -DPIC works... yes
> checking if /usr/bin/c++ static flag -static works... yes
> checking if /usr/bin/c++ supports -c -o file.o... yes
> checking if /usr/bin/c++ supports -c -o file.o... (cached) yes
> checking whether the /usr/bin/c++ linker (/usr/bin/ld -m elf_x86_64) supports
> shared libraries... yes
> checking dynamic linker characteristics... (cached) GNU/Linux ld.so
> checking how to hardcode library paths into programs... immediate
> checking if libtool supports shared libraries... yes
> checking whether to build shared libraries... yes
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> checking if ftn static flag works... yes
> checking if ftn supports -c -o file.o... yes
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> checking whether the ftn linker (/usr/bin/ld -m elf_x86_64) supports shared
> libraries... yes
> checking dynamic linker characteristics... (cached) GNU/Linux ld.so
> checking how to hardcode library paths into programs... immediate
> checking if libtool supports shared libraries... yes
> checking whether to build shared libraries... yes
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> checking for ftn option to produce PIC...
> checking if ftn static flag works... yes
> checking if ftn supports -c -o file.o... yes
> checking if ftn supports -c -o file.o... (cached) yes
> checking whether the ftn linker (/usr/bin/ld -m elf_x86_64) supports shared
> libraries... yes
> checking dynamic linker characteristics... (cached) GNU/Linux ld.so
> checking how to hardcode library paths into programs... immediate
> configure: finding other utilities
> checking for special C compiler options needed for large files... no
> checking for _FILE_OFFSET_BITS value needed for large files... no
> configure: displaying some results
> checking CPPFLAGS... -DNDEBUG
> checking CC CFLAGS... cc -O
> checking type cc... cc is /opt/cray/xt-asyncpe/4.4/bin/cc
> checking CXX... /usr/bin/c++
> checking CXXFLAGS... -O
> checking type /usr/bin/c++... /usr/bin/c++ is /usr/bin/c++
> checking FC... ftn
> checking FFLAGS... -xHOST -convert big_endian -FR
> checking type ftn... ftn is /opt/cray/xt-asyncpe/4.4/bin/ftn
> checking F90... unset
> checking AR... ar
> checking AR_FLAGS... cru
> checking type ar... ar is /usr/bin/ar
> checking NM... /usr/bin/nm -B
> checking NMFLAGS...
> configure: checking types, headers, and functions
> checking for stdlib.h... (cached) yes
> checking for sys/types.h... (cached) yes
> checking for dirent.h that defines DIR... yes
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> checking for ANSI C header files... (cached) yes
> checking for sys/wait.h that is POSIX.1 compatible... yes
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> checking locale.h usability... yes
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> checking stdio.h usability... yes
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> checking for malloc.h... yes
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> checking for string.h... (cached) yes
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> checking for unistd.h... (cached) yes
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> checking sys/resource.h presence... yes
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> checking for _doprnt... no
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> checking for strlcat... no
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> checking for strcat... yes
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> checking for strcasecmp... yes
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> checking for strtoll... yes
> checking for strtoull... yes
> checking for getrlimit... yes
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> checking for MPI_Comm_f2c... no
> checking for size_t... yes
> checking for working alloca.h... yes
> checking for alloca... yes
> checking whether isnan is declared... yes
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> checking whether isfinite is declared... no
> checking whether signbit is declared... no
> checking for struct stat.st_blksize... yes
> checking for IEEE floating point format... yes
> checking for size_t... (cached) yes
> checking for off_t... yes
> checking for ssize_t... yes
> checking for ptrdiff_t... yes
> checking for uchar... no
> checking for longlong... no
> checking whether char is unsigned... no
> checking whether byte ordering is bigendian... no
> checking size of short... 2
> checking size of int... 4
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> checking size of float... 4
> checking size of double... 8
> checking size of off_t... 8
> checking size of size_t... 8
> checking for floor in -lm... yes
> checking what to call the output of the ftpbin target...
> binary-netcdf-4.1.3_nc3_/usr/bin/c++.tar ftn /usr/bin/c++
> checking binary distribution directory... /home/ftp/pub/binary/dummy_system
> checking value of LIBS... -lm
> configure: generating header files and makefiles
> configure: creating ./config.status
> config.status: creating Makefile
> config.status: creating nc-config
> config.status: creating netcdf.pc
> config.status: creating include/Makefile
> config.status: creating h5_test/Makefile
> config.status: creating man4/Makefile
> config.status: creating fortran/Makefile
> config.status: creating libsrc/Makefile
> config.status: creating libsrc4/Makefile
> config.status: creating nctest/Makefile
> config.status: creating nc_test4/Makefile
> config.status: creating nc_test/Makefile
> config.status: creating ncdump/Makefile
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> config.status: creating nf_test/Makefile
> config.status: creating cxx/Makefile
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> config.status: creating examples/Makefile
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> config.status: creating examples/CDL/Makefile
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> config.status: creating examples/CXX4/Makefile
> config.status: creating examples/F90/Makefile
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> config.status: creating oc/Makefile
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> config.status: creating ncdap_test/Makefile
> config.status: creating ncdap_test/testdata3/Makefile
> config.status: creating ncdap_test/expected3/Makefile
> config.status: creating ncdap_test/expected4/Makefile
> config.status: creating ncdap_test/expectremote3/Makefile
> config.status: creating ncdap_test/expectremote4/Makefile
> config.status: creating ncdump/cdl4/Makefile
> config.status: creating ncdump/expected4/Makefile
> config.status: creating config.h
> config.status: creating fortran/nfconfig1.inc
> config.status: executing depfiles commands
> config.status: executing libtool commands
> === configuring in udunits
> (/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/udunits)
> configure: running /bin/sh ./configure --disable-option-checking
> '--prefix=/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf'
> '--disable-netcdf-4' '--disable-f77' 'CC=cc' 'CFLAGS=-O' 'CPPFLAGS=-DNDEBUG'
> 'FC=ftn' 'FCFLAGS=-xHOST -convert big_endian -FR' 'FFLAGS=-xHOST -convert
> big_endian -FR' 'CXX=/usr/bin/c++' 'CXXFLAGS=-O' --cache-file=/dev/null
> --srcdir=.
> checking for a BSD-compatible install... /usr/bin/install -c
> checking whether build environment is sane... yes
> checking for a thread-safe mkdir -p... /bin/mkdir -p
> checking for gawk... gawk
> checking whether make sets $(MAKE)... yes
> checking for gcc... cc
> checking whether the C compiler works... yes
> checking for C compiler default output file name... a.out
> checking for suffix of executables...
> checking whether we are cross compiling... no
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... yes
> checking whether cc accepts -g... yes
> checking for cc option to accept ISO C89... none needed
> checking for style of include used by make... GNU
> checking dependency style of cc... gcc3
> checking whether cc understands -c and -o together... yes
> checking how to run the C preprocessor... cc -E
> checking whether ln -s works... yes
> checking whether make sets $(MAKE)... (cached) yes
> checking for bison... bison -y
> checking for flex... flex
> checking lex output file root... lex.yy
> checking lex library... -lfl
> checking whether yytext is a pointer... yes
> checking for library containing dirname... none required
> checking for library containing log10... none required
> checking for library containing XML_StopParser... -lexpat
> checking for grep that handles long lines and -e... /usr/bin/grep
> checking for egrep... /usr/bin/grep -E
> checking for ANSI C header files... yes
> checking for sys/types.h... yes
> checking for sys/stat.h... yes
> checking for stdlib.h... yes
> checking for string.h... yes
> checking for memory.h... yes
> checking for strings.h... yes
> checking for inttypes.h... yes
> checking for stdint.h... yes
> checking for unistd.h... yes
> checking float.h usability... yes
> checking float.h presence... yes
> checking for float.h... yes
> checking for inttypes.h... (cached) yes
> checking stddef.h usability... yes
> checking stddef.h presence... yes
> checking for stddef.h... yes
> checking for stdlib.h... (cached) yes
> checking for string.h... (cached) yes
> checking for strings.h... (cached) yes
> configure: Checking for the CUNIT unit-testing package.
> checking CUnit/CUnit.h usability... no
> checking CUnit/CUnit.h presence... no
> checking for CUnit/CUnit.h... no
> configure: CUNIT not found. Disabling unit-tests.
> checking for an ANSI C-conforming const... yes
> checking for size_t... yes
> checking whether byte ordering is bigendian... no
> checking for floor... yes
> checking for memmove... yes
> checking for memset... yes
> checking for modf... yes
> checking for pow... yes
> checking for strcasecmp... yes
> checking for strdup... yes
> checking for strpbrk... yes
> checking build system type... x86_64-unknown-linux-gnu
> checking host system type... x86_64-unknown-linux-gnu
> checking how to print strings... printf
> checking for a sed that does not truncate output... /usr/bin/sed
> checking for fgrep... /usr/bin/grep -F
> checking for ld used by cc... /usr/bin/ld
> checking if the linker (/usr/bin/ld) is GNU ld... yes
> checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
> checking the name lister (/usr/bin/nm -B) interface... BSD nm
> checking the maximum length of command line arguments... 1572864
> checking whether the shell understands some XSI constructs... yes
> checking whether the shell understands "+="... yes
> checking how to convert x86_64-unknown-linux-gnu file names to
> x86_64-unknown-linux-gnu format... func_convert_file_noop
> checking how to convert x86_64-unknown-linux-gnu file names to toolchain
> format... func_convert_file_noop
> checking for /usr/bin/ld option to reload object files... -r
> checking for objdump... objdump
> checking how to recognize dependent libraries... pass_all
> checking for dlltool... no
> checking how to associate runtime and link libraries... printf %s\n
> checking for ar... ar
> checking for archiver @FILE support... @
> checking for strip... strip
> checking for ranlib... ranlib
> checking command to parse /usr/bin/nm -B output from cc object... ok
> checking for sysroot... no
> checking for mt... mt
> checking if mt is a manifest tool... no
> checking for dlfcn.h... yes
> checking for objdir... .libs
> checking if cc supports -fno-rtti -fno-exceptions... yes
> checking for cc option to produce PIC... -fPIC -DPIC
> checking if cc PIC flag -fPIC -DPIC works... yes
> checking if cc static flag -static works... yes
> checking if cc supports -c -o file.o... yes
> checking if cc supports -c -o file.o... (cached) yes
> checking whether the cc linker (/usr/bin/ld -m elf_x86_64) supports shared
> libraries... yes
> checking whether -lc should be explicitly linked in... no
> checking dynamic linker characteristics... icc: warning #10314: specifying
> -lm before object files may supercede the Intel(R) math library and affect
> performance
> GNU/Linux ld.so
> checking how to hardcode library paths into programs... immediate
> checking whether stripping libraries is possible... yes
> checking if libtool supports shared libraries... yes
> checking whether to build shared libraries... yes
> checking whether to build static libraries... yes
> configure: creating ./config.status
> config.status: creating Makefile
> config.status: creating expat/Makefile
> config.status: creating lib/Makefile
> config.status: creating lib/xmlFailures/Makefile
> config.status: creating lib/xmlSuccesses/Makefile
> config.status: creating prog/Makefile
> config.status: creating test/Makefile
> config.status: creating config.h
> config.status: creating expat/expat_config.h
> config.status: executing depfiles commands
> config.status: executing libtool commands
> === configuring in libcf
> (/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libcf)
> configure: running /bin/sh ./configure --disable-option-checking
> '--prefix=/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf'
> '--disable-netcdf-4' '--disable-f77' 'CC=cc' 'CFLAGS=-O' 'CPPFLAGS=-DNDEBUG'
> 'FC=ftn' 'FCFLAGS=-xHOST -convert big_endian -FR' 'FFLAGS=-xHOST -convert
> big_endian -FR' 'CXX=/usr/bin/c++' 'CXXFLAGS=-O' --cache-file=/dev/null
> --srcdir=.
> configure: libcf 1.0-alpha5
> checking build system type... x86_64-unknown-linux-gnu
> checking host system type... x86_64-unknown-linux-gnu
> checking for a BSD-compatible install... /usr/bin/install -c
> checking whether build environment is sane... yes
> checking for a thread-safe mkdir -p... /bin/mkdir -p
> checking for gawk... gawk
> checking whether make sets $(MAKE)... yes
> configure: checking user options
> checking whether FC is set to ''... no
> checking whether documentation is to be built... no
> checking whether gridspec tools are to be built... no
> checking whether gridspec test data should be fetched from Unidata FTP
> site... no
> checking whether cfcheck is to be built... yes
> checking whether logging is enabled (useful to CF developers, mainly... no
> checking whether netCDF-4 is to be used... no
> checking whether extra tests on sample data should be performed... no
> checking whether a location for the HDF5 library was specified...
> checking whether a location for the HDF4 library was specified...
> checking whether a location for the ZLIB library was specified...
> checking whether a location for the SZLIB library was specified...
> checking whether Fortran 90 API is desired... yes
> checking whether a location for the netCDF library was specified... no
> configure: finding C compiler
> checking whether the C compiler works... yes
> checking for C compiler default output file name... a.out
> checking for suffix of executables...
> checking whether we are cross compiling... no
> checking for suffix of object files... o
> checking whether we are using the GNU C compiler... yes
> checking whether cc accepts -g... yes
> checking for cc option to accept ISO C89... none needed
> checking for style of include used by make... GNU
> checking dependency style of cc... gcc3
> checking whether cc understands -c and -o together... yes
> configure: finding Fortran compiler (required, even if Fortran API is not
> desired)
> checking whether we are using the GNU Fortran compiler... no
> checking whether ftn accepts -g... yes
> checking for xlf... no
> checking for fort... no
> checking for xlf95... no
> checking for ifort... ifort
> checking whether we are using the GNU Fortran 77 compiler... no
> checking whether ifort accepts -g... yes
> checking for Fortran flag to compile .f90 files... none
> checking fortran 90 modules inclusion flag... -I
> checking if Fortran 90 compiler capitalizes .mod filenames... no
> configure: finding other utilities
> configure: setting up libtool
> checking how to print strings... printf
> checking for a sed that does not truncate output... /usr/bin/sed
> checking for grep that handles long lines and -e... /usr/bin/grep
> checking for egrep... /usr/bin/grep -E
> checking for fgrep... /usr/bin/grep -F
> checking for ld used by cc... /usr/bin/ld
> checking if the linker (/usr/bin/ld) is GNU ld... yes
> checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
> checking the name lister (/usr/bin/nm -B) interface... BSD nm
> checking whether ln -s works... yes
> checking the maximum length of command line arguments... 1572864
> checking whether the shell understands some XSI constructs... yes
> checking whether the shell understands "+="... yes
> checking how to convert x86_64-unknown-linux-gnu file names to
> x86_64-unknown-linux-gnu format... func_convert_file_noop
> checking how to convert x86_64-unknown-linux-gnu file names to toolchain
> format... func_convert_file_noop
> checking for /usr/bin/ld option to reload object files... -r
> checking for objdump... objdump
> checking how to recognize dependent libraries... pass_all
> checking for dlltool... dlltool
> checking how to associate runtime and link libraries... printf %s\n
> checking for ar... ar
> checking for archiver @FILE support... @
> checking for strip... strip
> checking for ranlib... ranlib
> checking command to parse /usr/bin/nm -B output from cc object... ok
> checking for sysroot... no
> checking for mt... mt
> checking if mt is a manifest tool... no
> checking how to run the C preprocessor... cc -E
> checking for ANSI C header files... yes
> checking for sys/types.h... yes
> checking for sys/stat.h... yes
> checking for stdlib.h... yes
> checking for string.h... yes
> checking for memory.h... yes
> checking for strings.h... yes
> checking for inttypes.h... yes
> checking for stdint.h... yes
> checking for unistd.h... yes
> checking for dlfcn.h... yes
> checking for objdir... .libs
> checking if cc supports -fno-rtti -fno-exceptions... yes
> checking for cc option to produce PIC... -fPIC -DPIC
> checking if cc PIC flag -fPIC -DPIC works... yes
> checking if cc static flag -static works... yes
> checking if cc supports -c -o file.o... yes
> checking if cc supports -c -o file.o... (cached) yes
> checking whether the cc linker (/usr/bin/ld -m elf_x86_64) supports shared
> libraries... yes
> checking dynamic linker characteristics... icc: warning #10314: specifying
> -lm before object files may supercede the Intel(R) math library and affect
> performance
> GNU/Linux ld.so
> checking how to hardcode library paths into programs... immediate
> checking whether stripping libraries is possible... yes
> checking if libtool supports shared libraries... yes
> checking whether to build shared libraries... no
> checking whether to build static libraries... yes
> checking if libtool supports shared libraries... yes
> checking whether to build shared libraries... no
> checking whether to build static libraries... yes
> checking for ifort option to produce PIC... -fPIC
> checking if ifort PIC flag -fPIC works... yes
> checking if ifort static flag -static works... yes
> checking if ifort supports -c -o file.o... yes
> checking if ifort supports -c -o file.o... (cached) yes
> checking whether the ifort linker (/usr/bin/ld -m elf_x86_64) supports shared
> libraries... yes
> checking dynamic linker characteristics... (cached) GNU/Linux ld.so
> checking how to hardcode library paths into programs... immediate
> checking if libtool supports shared libraries... yes
> checking whether to build shared libraries... no
> checking whether to build static libraries... yes
> checking for ftn option to produce PIC...
> checking if ftn static flag works... yes
> checking if ftn supports -c -o file.o... yes
> checking if ftn supports -c -o file.o... (cached) yes
> checking whether the ftn linker (/usr/bin/ld -m elf_x86_64) supports shared
> libraries... yes
> checking dynamic linker characteristics... (cached) GNU/Linux ld.so
> checking how to hardcode library paths into programs... immediate
> configure: checking for large file support
> checking for special C compiler options needed for large files... no
> checking for _FILE_OFFSET_BITS value needed for large files... no
> configure: checking types, headers, and functions
> checking for stdlib.h... (cached) yes
> checking for sys/types.h... (cached) yes
> checking for unistd.h... (cached) yes
> checking for strerror... yes
> checking for strlcat... no
> checking for size_t... yes
> checking for working alloca.h... yes
> checking for alloca... yes
> checking for struct stat.st_blksize... yes
> checking for size_t... (cached) yes
> checking for off_t... yes
> checking for ssize_t... yes
> checking for ptrdiff_t... yes
> checking for uchar... no
> checking whether char is unsigned... no
> checking whether byte ordering is bigendian... no
> checking size of short... 2
> checking size of int... 4
> checking size of long... 8
> checking size of float... 4
> checking size of double... 8
> checking size of off_t... 8
> checking size of size_t... 8
> checking for library containing floor... none required
> configure: generating header files and makefiles
> configure: creating ./config.status
> config.status: creating gridspec/tools/make_hgrid/run_tests
> config.status: creating gridspec/tools/make_vgrid/run_tests
> config.status: creating gridspec/tools/make_topog/run_tests
> config.status: creating Makefile
> config.status: creating doc/Makefile
> config.status: creating cfcheck/Makefile
> config.status: creating src/Makefile
> config.status: creating config.h
> config.status: creating nfconfig.inc
> config.status: executing depfiles commands
> config.status: executing libtool commands
> + make
> make all-recursive
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3'
> Making all in include
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/include'
> make[2]: Nothing to be done for `all'.
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/include'
> Making all in libdispatch
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libdispatch'
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libdispatch_la-parallel.lo -MD
> -MP -MF .deps/libdispatch_la-parallel.Tpo -c -o libdispatch_la-parallel.lo
> `test -f 'parallel.c' || echo './'`parallel.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-parallel.lo -MD -MP -MF
> .deps/libdispatch_la-parallel.Tpo -c parallel.c -fPIC -DPIC -o
> .libs/libdispatch_la-parallel.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-parallel.lo -MD -MP -MF
> .deps/libdispatch_la-parallel.Tpo -c parallel.c -o libdispatch_la-parallel.o
> >/dev/null 2>&1
> mv -f .deps/libdispatch_la-parallel.Tpo .deps/libdispatch_la-parallel.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libdispatch_la-copy.lo -MD -MP
> -MF .deps/libdispatch_la-copy.Tpo -c -o libdispatch_la-copy.lo `test -f
> 'copy.c' || echo './'`copy.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-copy.lo -MD -MP -MF
> .deps/libdispatch_la-copy.Tpo -c copy.c -fPIC -DPIC -o
> .libs/libdispatch_la-copy.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-copy.lo -MD -MP -MF
> .deps/libdispatch_la-copy.Tpo -c copy.c -o libdispatch_la-copy.o >/dev/null
> 2>&1
> mv -f .deps/libdispatch_la-copy.Tpo .deps/libdispatch_la-copy.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libdispatch_la-file.lo -MD -MP
> -MF .deps/libdispatch_la-file.Tpo -c -o libdispatch_la-file.lo `test -f
> 'file.c' || echo './'`file.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-file.lo -MD -MP -MF
> .deps/libdispatch_la-file.Tpo -c file.c -fPIC -DPIC -o
> .libs/libdispatch_la-file.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-file.lo -MD -MP -MF
> .deps/libdispatch_la-file.Tpo -c file.c -o libdispatch_la-file.o >/dev/null
> 2>&1
> mv -f .deps/libdispatch_la-file.Tpo .deps/libdispatch_la-file.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libdispatch_la-dim.lo -MD -MP
> -MF .deps/libdispatch_la-dim.Tpo -c -o libdispatch_la-dim.lo `test -f 'dim.c'
> || echo './'`dim.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-dim.lo -MD -MP -MF
> .deps/libdispatch_la-dim.Tpo -c dim.c -fPIC -DPIC -o
> .libs/libdispatch_la-dim.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-dim.lo -MD -MP -MF
> .deps/libdispatch_la-dim.Tpo -c dim.c -o libdispatch_la-dim.o >/dev/null 2>&1
> mv -f .deps/libdispatch_la-dim.Tpo .deps/libdispatch_la-dim.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libdispatch_la-att.lo -MD -MP
> -MF .deps/libdispatch_la-att.Tpo -c -o libdispatch_la-att.lo `test -f 'att.c'
> || echo './'`att.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-att.lo -MD -MP -MF
> .deps/libdispatch_la-att.Tpo -c att.c -fPIC -DPIC -o
> .libs/libdispatch_la-att.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-att.lo -MD -MP -MF
> .deps/libdispatch_la-att.Tpo -c att.c -o libdispatch_la-att.o >/dev/null 2>&1
> mv -f .deps/libdispatch_la-att.Tpo .deps/libdispatch_la-att.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libdispatch_la-error.lo -MD
> -MP -MF .deps/libdispatch_la-error.Tpo -c -o libdispatch_la-error.lo `test -f
> 'error.c' || echo './'`error.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-error.lo -MD -MP -MF
> .deps/libdispatch_la-error.Tpo -c error.c -fPIC -DPIC -o
> .libs/libdispatch_la-error.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-error.lo -MD -MP -MF
> .deps/libdispatch_la-error.Tpo -c error.c -o libdispatch_la-error.o
> >/dev/null 2>&1
> mv -f .deps/libdispatch_la-error.Tpo .deps/libdispatch_la-error.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libdispatch_la-var.lo -MD -MP
> -MF .deps/libdispatch_la-var.Tpo -c -o libdispatch_la-var.lo `test -f 'var.c'
> || echo './'`var.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-var.lo -MD -MP -MF
> .deps/libdispatch_la-var.Tpo -c var.c -fPIC -DPIC -o
> .libs/libdispatch_la-var.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-var.lo -MD -MP -MF
> .deps/libdispatch_la-var.Tpo -c var.c -o libdispatch_la-var.o >/dev/null 2>&1
> mv -f .deps/libdispatch_la-var.Tpo .deps/libdispatch_la-var.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libdispatch_la-dispatch.lo -MD
> -MP -MF .deps/libdispatch_la-dispatch.Tpo -c -o libdispatch_la-dispatch.lo
> `test -f 'dispatch.c' || echo './'`dispatch.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-dispatch.lo -MD -MP -MF
> .deps/libdispatch_la-dispatch.Tpo -c dispatch.c -fPIC -DPIC -o
> .libs/libdispatch_la-dispatch.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-dispatch.lo -MD -MP -MF
> .deps/libdispatch_la-dispatch.Tpo -c dispatch.c -o libdispatch_la-dispatch.o
> >/dev/null 2>&1
> mv -f .deps/libdispatch_la-dispatch.Tpo .deps/libdispatch_la-dispatch.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libdispatch_la-nc_uri.lo -MD
> -MP -MF .deps/libdispatch_la-nc_uri.Tpo -c -o libdispatch_la-nc_uri.lo `test
> -f 'nc_uri.c' || echo './'`nc_uri.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-nc_uri.lo -MD -MP -MF
> .deps/libdispatch_la-nc_uri.Tpo -c nc_uri.c -fPIC -DPIC -o
> .libs/libdispatch_la-nc_uri.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-nc_uri.lo -MD -MP -MF
> .deps/libdispatch_la-nc_uri.Tpo -c nc_uri.c -o libdispatch_la-nc_uri.o
> >/dev/null 2>&1
> mv -f .deps/libdispatch_la-nc_uri.Tpo .deps/libdispatch_la-nc_uri.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libdispatch_la-nclist.lo -MD
> -MP -MF .deps/libdispatch_la-nclist.Tpo -c -o libdispatch_la-nclist.lo `test
> -f 'nclist.c' || echo './'`nclist.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-nclist.lo -MD -MP -MF
> .deps/libdispatch_la-nclist.Tpo -c nclist.c -fPIC -DPIC -o
> .libs/libdispatch_la-nclist.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-nclist.lo -MD -MP -MF
> .deps/libdispatch_la-nclist.Tpo -c nclist.c -o libdispatch_la-nclist.o
> >/dev/null 2>&1
> mv -f .deps/libdispatch_la-nclist.Tpo .deps/libdispatch_la-nclist.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libdispatch_la-ncbytes.lo -MD
> -MP -MF .deps/libdispatch_la-ncbytes.Tpo -c -o libdispatch_la-ncbytes.lo
> `test -f 'ncbytes.c' || echo './'`ncbytes.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-ncbytes.lo -MD -MP -MF
> .deps/libdispatch_la-ncbytes.Tpo -c ncbytes.c -fPIC -DPIC -o
> .libs/libdispatch_la-ncbytes.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-ncbytes.lo -MD -MP -MF
> .deps/libdispatch_la-ncbytes.Tpo -c ncbytes.c -o libdispatch_la-ncbytes.o
> >/dev/null 2>&1
> mv -f .deps/libdispatch_la-ncbytes.Tpo .deps/libdispatch_la-ncbytes.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libdispatch_la-nchashmap.lo
> -MD -MP -MF .deps/libdispatch_la-nchashmap.Tpo -c -o
> libdispatch_la-nchashmap.lo `test -f 'nchashmap.c' || echo './'`nchashmap.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-nchashmap.lo -MD -MP -MF
> .deps/libdispatch_la-nchashmap.Tpo -c nchashmap.c -fPIC -DPIC -o
> .libs/libdispatch_la-nchashmap.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-nchashmap.lo -MD -MP -MF
> .deps/libdispatch_la-nchashmap.Tpo -c nchashmap.c -o
> libdispatch_la-nchashmap.o >/dev/null 2>&1
> mv -f .deps/libdispatch_la-nchashmap.Tpo .deps/libdispatch_la-nchashmap.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libdispatch_la-nclog.lo -MD
> -MP -MF .deps/libdispatch_la-nclog.Tpo -c -o libdispatch_la-nclog.lo `test -f
> 'nclog.c' || echo './'`nclog.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-nclog.lo -MD -MP -MF
> .deps/libdispatch_la-nclog.Tpo -c nclog.c -fPIC -DPIC -o
> .libs/libdispatch_la-nclog.o
> nclog.c(175): warning #592: variable "i" is used before its value is set
> while(*p && i < MAXTAGS) {i++;}
> ^
>
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libdispatch_la-nclog.lo -MD -MP -MF
> .deps/libdispatch_la-nclog.Tpo -c nclog.c -o libdispatch_la-nclog.o
> >/dev/null 2>&1
> mv -f .deps/libdispatch_la-nclog.Tpo .deps/libdispatch_la-nclog.Plo
> /bin/sh ../libtool --tag=CC --mode=link cc -O -o libdispatch.la
> libdispatch_la-parallel.lo libdispatch_la-copy.lo libdispatch_la-file.lo
> libdispatch_la-dim.lo libdispatch_la-att.lo libdispatch_la-error.lo
> libdispatch_la-var.lo libdispatch_la-dispatch.lo libdispatch_la-nc_uri.lo
> libdispatch_la-nclist.lo libdispatch_la-ncbytes.lo
> libdispatch_la-nchashmap.lo libdispatch_la-nclog.lo -lm
> libtool: link: ar cru .libs/libdispatch.a .libs/libdispatch_la-parallel.o
> .libs/libdispatch_la-copy.o .libs/libdispatch_la-file.o
> .libs/libdispatch_la-dim.o .libs/libdispatch_la-att.o
> .libs/libdispatch_la-error.o .libs/libdispatch_la-var.o
> .libs/libdispatch_la-dispatch.o .libs/libdispatch_la-nc_uri.o
> .libs/libdispatch_la-nclist.o .libs/libdispatch_la-ncbytes.o
> .libs/libdispatch_la-nchashmap.o .libs/libdispatch_la-nclog.o
> libtool: link: ranlib .libs/libdispatch.a
> libtool: link: ( cd ".libs" && rm -f "libdispatch.la" && ln -s
> "../libdispatch.la" "libdispatch.la" )
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DDLL_EXPORT -DNDEBUG -O -MT
> libnetcdf2_la-v2i.lo -MD -MP -MF .deps/libnetcdf2_la-v2i.Tpo -c -o
> libnetcdf2_la-v2i.lo `test -f 'v2i.c' || echo './'`v2i.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DDLL_EXPORT -DNDEBUG -O -MT libnetcdf2_la-v2i.lo -MD -MP -MF
> .deps/libnetcdf2_la-v2i.Tpo -c v2i.c -fPIC -DPIC -o .libs/libnetcdf2_la-v2i.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DDLL_EXPORT -DNDEBUG -O -MT libnetcdf2_la-v2i.lo -MD -MP -MF
> .deps/libnetcdf2_la-v2i.Tpo -c v2i.c -o libnetcdf2_la-v2i.o >/dev/null 2>&1
> mv -f .deps/libnetcdf2_la-v2i.Tpo .deps/libnetcdf2_la-v2i.Plo
> /bin/sh ../libtool --tag=CC --mode=link cc -O -o libnetcdf2.la
> libnetcdf2_la-v2i.lo -lm
> libtool: link: ar cru .libs/libnetcdf2.a .libs/libnetcdf2_la-v2i.o
> libtool: link: ranlib .libs/libnetcdf2.a
> libtool: link: ( cd ".libs" && rm -f "libnetcdf2.la" && ln -s
> "../libnetcdf2.la" "libnetcdf2.la" )
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libdispatch'
> Making all in libsrc
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libsrc'
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libnetcdf3_la-string.lo -MD -MP
> -MF .deps/libnetcdf3_la-string.Tpo -c -o libnetcdf3_la-string.lo `test -f
> 'string.c' || echo './'`string.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-string.lo -MD -MP -MF
> .deps/libnetcdf3_la-string.Tpo -c string.c -fPIC -DPIC -o
> .libs/libnetcdf3_la-string.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-string.lo -MD -MP -MF
> .deps/libnetcdf3_la-string.Tpo -c string.c -o libnetcdf3_la-string.o
> >/dev/null 2>&1
> mv -f .deps/libnetcdf3_la-string.Tpo .deps/libnetcdf3_la-string.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libnetcdf3_la-v1hpg.lo -MD -MP
> -MF .deps/libnetcdf3_la-v1hpg.Tpo -c -o libnetcdf3_la-v1hpg.lo `test -f
> 'v1hpg.c' || echo './'`v1hpg.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-v1hpg.lo -MD -MP -MF
> .deps/libnetcdf3_la-v1hpg.Tpo -c v1hpg.c -fPIC -DPIC -o
> .libs/libnetcdf3_la-v1hpg.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-v1hpg.lo -MD -MP -MF
> .deps/libnetcdf3_la-v1hpg.Tpo -c v1hpg.c -o libnetcdf3_la-v1hpg.o >/dev/null
> 2>&1
> mv -f .deps/libnetcdf3_la-v1hpg.Tpo .deps/libnetcdf3_la-v1hpg.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libnetcdf3_la-utf8proc.lo -MD
> -MP -MF .deps/libnetcdf3_la-utf8proc.Tpo -c -o libnetcdf3_la-utf8proc.lo
> `test -f 'utf8proc.c' || echo './'`utf8proc.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-utf8proc.lo -MD -MP -MF
> .deps/libnetcdf3_la-utf8proc.Tpo -c utf8proc.c -fPIC -DPIC -o
> .libs/libnetcdf3_la-utf8proc.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-utf8proc.lo -MD -MP -MF
> .deps/libnetcdf3_la-utf8proc.Tpo -c utf8proc.c -o libnetcdf3_la-utf8proc.o
> >/dev/null 2>&1
> mv -f .deps/libnetcdf3_la-utf8proc.Tpo .deps/libnetcdf3_la-utf8proc.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libnetcdf3_la-nclistmgr.lo -MD
> -MP -MF .deps/libnetcdf3_la-nclistmgr.Tpo -c -o libnetcdf3_la-nclistmgr.lo
> `test -f 'nclistmgr.c' || echo './'`nclistmgr.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-nclistmgr.lo -MD -MP -MF
> .deps/libnetcdf3_la-nclistmgr.Tpo -c nclistmgr.c -fPIC -DPIC -o
> .libs/libnetcdf3_la-nclistmgr.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-nclistmgr.lo -MD -MP -MF
> .deps/libnetcdf3_la-nclistmgr.Tpo -c nclistmgr.c -o libnetcdf3_la-nclistmgr.o
> >/dev/null 2>&1
> mv -f .deps/libnetcdf3_la-nclistmgr.Tpo .deps/libnetcdf3_la-nclistmgr.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libnetcdf3_la-putget.lo -MD -MP
> -MF .deps/libnetcdf3_la-putget.Tpo -c -o libnetcdf3_la-putget.lo `test -f
> 'putget.c' || echo './'`putget.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-putget.lo -MD -MP -MF
> .deps/libnetcdf3_la-putget.Tpo -c putget.c -fPIC -DPIC -o
> .libs/libnetcdf3_la-putget.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-putget.lo -MD -MP -MF
> .deps/libnetcdf3_la-putget.Tpo -c putget.c -o libnetcdf3_la-putget.o
> >/dev/null 2>&1
> mv -f .deps/libnetcdf3_la-putget.Tpo .deps/libnetcdf3_la-putget.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libnetcdf3_la-attr.lo -MD -MP
> -MF .deps/libnetcdf3_la-attr.Tpo -c -o libnetcdf3_la-attr.lo `test -f
> 'attr.c' || echo './'`attr.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-attr.lo -MD -MP -MF
> .deps/libnetcdf3_la-attr.Tpo -c attr.c -fPIC -DPIC -o
> .libs/libnetcdf3_la-attr.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-attr.lo -MD -MP -MF
> .deps/libnetcdf3_la-attr.Tpo -c attr.c -o libnetcdf3_la-attr.o >/dev/null 2>&1
> mv -f .deps/libnetcdf3_la-attr.Tpo .deps/libnetcdf3_la-attr.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libnetcdf3_la-nc3dispatch.lo
> -MD -MP -MF .deps/libnetcdf3_la-nc3dispatch.Tpo -c -o
> libnetcdf3_la-nc3dispatch.lo `test -f 'nc3dispatch.c' || echo
> './'`nc3dispatch.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-nc3dispatch.lo -MD -MP -MF
> .deps/libnetcdf3_la-nc3dispatch.Tpo -c nc3dispatch.c -fPIC -DPIC -o
> .libs/libnetcdf3_la-nc3dispatch.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-nc3dispatch.lo -MD -MP -MF
> .deps/libnetcdf3_la-nc3dispatch.Tpo -c nc3dispatch.c -o
> libnetcdf3_la-nc3dispatch.o >/dev/null 2>&1
> mv -f .deps/libnetcdf3_la-nc3dispatch.Tpo .deps/libnetcdf3_la-nc3dispatch.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libnetcdf3_la-nc.lo -MD -MP -MF
> .deps/libnetcdf3_la-nc.Tpo -c -o libnetcdf3_la-nc.lo `test -f 'nc.c' || echo
> './'`nc.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-nc.lo -MD -MP -MF .deps/libnetcdf3_la-nc.Tpo -c
> nc.c -fPIC -DPIC -o .libs/libnetcdf3_la-nc.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-nc.lo -MD -MP -MF .deps/libnetcdf3_la-nc.Tpo -c
> nc.c -o libnetcdf3_la-nc.o >/dev/null 2>&1
> mv -f .deps/libnetcdf3_la-nc.Tpo .deps/libnetcdf3_la-nc.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libnetcdf3_la-var.lo -MD -MP
> -MF .deps/libnetcdf3_la-var.Tpo -c -o libnetcdf3_la-var.lo `test -f 'var.c'
> || echo './'`var.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-var.lo -MD -MP -MF .deps/libnetcdf3_la-var.Tpo
> -c var.c -fPIC -DPIC -o .libs/libnetcdf3_la-var.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-var.lo -MD -MP -MF .deps/libnetcdf3_la-var.Tpo
> -c var.c -o libnetcdf3_la-var.o >/dev/null 2>&1
> mv -f .deps/libnetcdf3_la-var.Tpo .deps/libnetcdf3_la-var.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libnetcdf3_la-dim.lo -MD -MP
> -MF .deps/libnetcdf3_la-dim.Tpo -c -o libnetcdf3_la-dim.lo `test -f 'dim.c'
> || echo './'`dim.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-dim.lo -MD -MP -MF .deps/libnetcdf3_la-dim.Tpo
> -c dim.c -fPIC -DPIC -o .libs/libnetcdf3_la-dim.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-dim.lo -MD -MP -MF .deps/libnetcdf3_la-dim.Tpo
> -c dim.c -o libnetcdf3_la-dim.o >/dev/null 2>&1
> mv -f .deps/libnetcdf3_la-dim.Tpo .deps/libnetcdf3_la-dim.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libnetcdf3_la-ncx.lo -MD -MP
> -MF .deps/libnetcdf3_la-ncx.Tpo -c -o libnetcdf3_la-ncx.lo `test -f 'ncx.c'
> || echo './'`ncx.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-ncx.lo -MD -MP -MF .deps/libnetcdf3_la-ncx.Tpo
> -c ncx.c -fPIC -DPIC -o .libs/libnetcdf3_la-ncx.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-ncx.lo -MD -MP -MF .deps/libnetcdf3_la-ncx.Tpo
> -c ncx.c -o libnetcdf3_la-ncx.o >/dev/null 2>&1
> mv -f .deps/libnetcdf3_la-ncx.Tpo .deps/libnetcdf3_la-ncx.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libnetcdf3_la-lookup3.lo -MD
> -MP -MF .deps/libnetcdf3_la-lookup3.Tpo -c -o libnetcdf3_la-lookup3.lo `test
> -f 'lookup3.c' || echo './'`lookup3.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-lookup3.lo -MD -MP -MF
> .deps/libnetcdf3_la-lookup3.Tpo -c lookup3.c -fPIC -DPIC -o
> .libs/libnetcdf3_la-lookup3.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-lookup3.lo -MD -MP -MF
> .deps/libnetcdf3_la-lookup3.Tpo -c lookup3.c -o libnetcdf3_la-lookup3.o
> >/dev/null 2>&1
> mv -f .deps/libnetcdf3_la-lookup3.Tpo .deps/libnetcdf3_la-lookup3.Plo
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libnetcdf3_la-posixio.lo -MD
> -MP -MF .deps/libnetcdf3_la-posixio.Tpo -c -o libnetcdf3_la-posixio.lo `test
> -f 'posixio.c' || echo './'`posixio.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-posixio.lo -MD -MP -MF
> .deps/libnetcdf3_la-posixio.Tpo -c posixio.c -fPIC -DPIC -o
> .libs/libnetcdf3_la-posixio.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf3_la-posixio.lo -MD -MP -MF
> .deps/libnetcdf3_la-posixio.Tpo -c posixio.c -o libnetcdf3_la-posixio.o
> >/dev/null 2>&1
> mv -f .deps/libnetcdf3_la-posixio.Tpo .deps/libnetcdf3_la-posixio.Plo
> /bin/sh ../libtool --tag=CC --mode=link cc -O -o libnetcdf3.la
> libnetcdf3_la-string.lo libnetcdf3_la-v1hpg.lo libnetcdf3_la-utf8proc.lo
> libnetcdf3_la-nclistmgr.lo libnetcdf3_la-putget.lo libnetcdf3_la-attr.lo
> libnetcdf3_la-nc3dispatch.lo libnetcdf3_la-nc.lo libnetcdf3_la-var.lo
> libnetcdf3_la-dim.lo libnetcdf3_la-ncx.lo libnetcdf3_la-lookup3.lo
> libnetcdf3_la-posixio.lo -lm
> libtool: link: ar cru .libs/libnetcdf3.a .libs/libnetcdf3_la-string.o
> .libs/libnetcdf3_la-v1hpg.o .libs/libnetcdf3_la-utf8proc.o
> .libs/libnetcdf3_la-nclistmgr.o .libs/libnetcdf3_la-putget.o
> .libs/libnetcdf3_la-attr.o .libs/libnetcdf3_la-nc3dispatch.o
> .libs/libnetcdf3_la-nc.o .libs/libnetcdf3_la-var.o .libs/libnetcdf3_la-dim.o
> .libs/libnetcdf3_la-ncx.o .libs/libnetcdf3_la-lookup3.o
> .libs/libnetcdf3_la-posixio.o
> libtool: link: ranlib .libs/libnetcdf3.a
> libtool: link: ( cd ".libs" && rm -f "libnetcdf3.la" && ln -s
> "../libnetcdf3.la" "libnetcdf3.la" )
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libsrc'
> Making all in liblib
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/liblib'
> /bin/sh ../libtool --tag=CC --mode=compile cc -DHAVE_CONFIG_H -I. -I..
> -I../fortran -I../include -DNDEBUG -O -MT libnetcdf_la-stub.lo -MD -MP
> -MF .deps/libnetcdf_la-stub.Tpo -c -o libnetcdf_la-stub.lo `test -f 'stub.c'
> || echo './'`stub.c
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf_la-stub.lo -MD -MP -MF .deps/libnetcdf_la-stub.Tpo
> -c stub.c -fPIC -DPIC -o .libs/libnetcdf_la-stub.o
> libtool: compile: cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include
> -DNDEBUG -O -MT libnetcdf_la-stub.lo -MD -MP -MF .deps/libnetcdf_la-stub.Tpo
> -c stub.c -o libnetcdf_la-stub.o >/dev/null 2>&1
> mv -f .deps/libnetcdf_la-stub.Tpo .deps/libnetcdf_la-stub.Plo
> /bin/sh ../libtool --tag=CC --mode=link cc -O -version-number 7:1:1 -o
> libnetcdf.la -rpath
> /lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf/lib
> libnetcdf_la-stub.lo ../libdispatch/libnetcdf2.la
> ../libdispatch/libdispatch.la ../libsrc/libnetcdf3.la -lm
> libtool: link: cc -shared -fPIC -DPIC .libs/libnetcdf_la-stub.o
> -Wl,--whole-archive ../libdispatch/.libs/libnetcdf2.a
> ../libdispatch/.libs/libdispatch.a ../libsrc/.libs/libnetcdf3.a
> -Wl,--no-whole-archive -lm -O -Wl,-soname -Wl,libnetcdf.so.7 -o
> .libs/libnetcdf.so.7.1.1
> libtool: link: (cd ".libs" && rm -f "libnetcdf.so.7" && ln -s
> "libnetcdf.so.7.1.1" "libnetcdf.so.7")
> libtool: link: (cd ".libs" && rm -f "libnetcdf.so" && ln -s
> "libnetcdf.so.7.1.1" "libnetcdf.so")
> libtool: link: (cd .libs/libnetcdf.lax/libnetcdf2.a && ar x
> "/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/liblib/../libdispatch/.libs/libnetcdf2.a")
> libtool: link: (cd .libs/libnetcdf.lax/libdispatch.a && ar x
> "/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/liblib/../libdispatch/.libs/libdispatch.a")
> libtool: link: (cd .libs/libnetcdf.lax/libnetcdf3.a && ar x
> "/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/liblib/../libsrc/.libs/libnetcdf3.a")
> libtool: link: ar cru .libs/libnetcdf.a libnetcdf_la-stub.o
> .libs/libnetcdf.lax/libnetcdf2.a/libnetcdf2_la-v2i.o
> .libs/libnetcdf.lax/libdispatch.a/libdispatch_la-att.o
> .libs/libnetcdf.lax/libdispatch.a/libdispatch_la-copy.o
> .libs/libnetcdf.lax/libdispatch.a/libdispatch_la-dim.o
> .libs/libnetcdf.lax/libdispatch.a/libdispatch_la-dispatch.o
> .libs/libnetcdf.lax/libdispatch.a/libdispatch_la-error.o
> .libs/libnetcdf.lax/libdispatch.a/libdispatch_la-file.o
> .libs/libnetcdf.lax/libdispatch.a/libdispatch_la-nc_uri.o
> .libs/libnetcdf.lax/libdispatch.a/libdispatch_la-ncbytes.o
> .libs/libnetcdf.lax/libdispatch.a/libdispatch_la-nchashmap.o
> .libs/libnetcdf.lax/libdispatch.a/libdispatch_la-nclist.o
> .libs/libnetcdf.lax/libdispatch.a/libdispatch_la-nclog.o
> .libs/libnetcdf.lax/libdispatch.a/libdispatch_la-parallel.o
> .libs/libnetcdf.lax/libdispatch.a/libdispatch_la-var.o
> .libs/libnetcdf.lax/libnetcdf3.a/libnetcdf3_la-attr.o
> .libs/libnetcdf.lax/libnetcdf3.a/libnetcdf3_la-dim.o .libs/libnetcdf.l
ax/libnetcdf3.a/libnetcdf3_la-lookup3.o
.libs/libnetcdf.lax/libnetcdf3.a/libnetcdf3_la-nc.o
.libs/libnetcdf.lax/libnetcdf3.a/libnetcdf3_la-nc3dispatch.o
.libs/libnetcdf.lax/libnetcdf3.a/libnetcdf3_la-nclistmgr.o
.libs/libnetcdf.lax/libnetcdf3.a/libnetcdf3_la-ncx.o
.libs/libnetcdf.lax/libnetcdf3.a/libnetcdf3_la-posixio.o
.libs/libnetcdf.lax/libnetcdf3.a/libnetcdf3_la-putget.o
.libs/libnetcdf.lax/libnetcdf3.a/libnetcdf3_la-string.o
.libs/libnetcdf.lax/libnetcdf3.a/libnetcdf3_la-utf8proc.o
.libs/libnetcdf.lax/libnetcdf3.a/libnetcdf3_la-v1hpg.o
.libs/libnetcdf.lax/libnetcdf3.a/libnetcdf3_la-var.o
> libtool: link: ranlib .libs/libnetcdf.a
> libtool: link: rm -fr .libs/libnetcdf.lax
> libtool: link: ( cd ".libs" && rm -f "libnetcdf.la" && ln -s
> "../libnetcdf.la" "libnetcdf.la" )
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/liblib'
> Making all in nctest
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nctest'
> make[2]: Nothing to be done for `all'.
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nctest'
> Making all in nc_test
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nc_test'
> make[2]: Nothing to be done for `all'.
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nc_test'
> Making all in ncgen3
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncgen3'
> depbase=`echo main.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> main.o -MD -MP -MF $depbase.Tpo -c -o main.o main.c &&\
> mv -f $depbase.Tpo $depbase.Po
> main.c(236): warning #77: this declaration has no storage class or type
> specifier
> END_OF_MAIN();
> ^
>
> depbase=`echo load.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> load.o -MD -MP -MF $depbase.Tpo -c -o load.o load.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo escapes.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> escapes.o -MD -MP -MF $depbase.Tpo -c -o escapes.o escapes.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo getfill.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> getfill.o -MD -MP -MF $depbase.Tpo -c -o getfill.o getfill.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo init.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> init.o -MD -MP -MF $depbase.Tpo -c -o init.o init.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo genlib.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> genlib.o -MD -MP -MF $depbase.Tpo -c -o genlib.o genlib.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo ncgentab.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> ncgentab.o -MD -MP -MF $depbase.Tpo -c -o ncgentab.o ncgentab.c &&\
> mv -f $depbase.Tpo $depbase.Po
> /bin/sh ../libtool --tag=CC --mode=link cc -O -o ncgen3 main.o load.o
> escapes.o getfill.o init.o genlib.o ncgentab.o ../liblib/libnetcdf.la -lm
> libtool: link: cc -O -o .libs/ncgen3 main.o load.o escapes.o getfill.o init.o
> genlib.o ncgentab.o ../liblib/.libs/libnetcdf.so -lm -Wl,-rpath
> -Wl,/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf/lib
> ld: attempted static link of dynamic object `../liblib/.libs/libnetcdf.so'
> make[2]: *** [ncgen3] Error 1
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/ncgen3'
> make[1]: *** [all-recursive] Error 1
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3'
> make: *** [all] Error 2
> + make check install
> Making check in include
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/include'
> make[1]: Nothing to be done for `check'.
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/include'
> Making check in libdispatch
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libdispatch'
> make[1]: Nothing to be done for `check'.
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libdispatch'
> Making check in libsrc
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libsrc'
> make[1]: Nothing to be done for `check'.
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/libsrc'
> Making check in liblib
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/liblib'
> make[1]: Nothing to be done for `check'.
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/liblib'
> Making check in nctest
> make[1]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nctest'
> make nctest tst_rename
> make[2]: Entering directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nctest'
> depbase=`echo add.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> add.o -MD -MP -MF $depbase.Tpo -c -o add.o add.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo atttests.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> atttests.o -MD -MP -MF $depbase.Tpo -c -o atttests.o atttests.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo cdftests.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> cdftests.o -MD -MP -MF $depbase.Tpo -c -o cdftests.o cdftests.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo dimtests.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> dimtests.o -MD -MP -MF $depbase.Tpo -c -o dimtests.o dimtests.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo driver.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> driver.o -MD -MP -MF $depbase.Tpo -c -o driver.o driver.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo emalloc.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> emalloc.o -MD -MP -MF $depbase.Tpo -c -o emalloc.o emalloc.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo error.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> error.o -MD -MP -MF $depbase.Tpo -c -o error.o error.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo misctest.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> misctest.o -MD -MP -MF $depbase.Tpo -c -o misctest.o misctest.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo rec.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> rec.o -MD -MP -MF $depbase.Tpo -c -o rec.o rec.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo slabs.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> slabs.o -MD -MP -MF $depbase.Tpo -c -o slabs.o slabs.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo val.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> val.o -MD -MP -MF $depbase.Tpo -c -o val.o val.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo vardef.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> vardef.o -MD -MP -MF $depbase.Tpo -c -o vardef.o vardef.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo varget.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> varget.o -MD -MP -MF $depbase.Tpo -c -o varget.o varget.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo vargetg.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> vargetg.o -MD -MP -MF $depbase.Tpo -c -o vargetg.o vargetg.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo varput.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> varput.o -MD -MP -MF $depbase.Tpo -c -o varput.o varput.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo varputg.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> varputg.o -MD -MP -MF $depbase.Tpo -c -o varputg.o varputg.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo vartests.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> vartests.o -MD -MP -MF $depbase.Tpo -c -o vartests.o vartests.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo vputget.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> vputget.o -MD -MP -MF $depbase.Tpo -c -o vputget.o vputget.c &&\
> mv -f $depbase.Tpo $depbase.Po
> depbase=`echo vputgetg.o | sed 's|[^/]*$|.deps/&|;s|\.o$||'`;\
> cc -DHAVE_CONFIG_H -I. -I.. -I../fortran -I../include -DNDEBUG -O -MT
> vputgetg.o -MD -MP -MF $depbase.Tpo -c -o vputgetg.o vputgetg.c &&\
> mv -f $depbase.Tpo $depbase.Po
> /bin/sh ../libtool --tag=CC --mode=link cc -O ../liblib/libnetcdf.la -o
> nctest add.o atttests.o cdftests.o dimtests.o driver.o emalloc.o error.o
> misctest.o rec.o slabs.o val.o vardef.o varget.o vargetg.o varput.o varputg.o
> vartests.o vputget.o vputgetg.o -lm
> libtool: link: cc -O -o .libs/nctest add.o atttests.o cdftests.o dimtests.o
> driver.o emalloc.o error.o misctest.o rec.o slabs.o val.o vardef.o varget.o
> vargetg.o varput.o varputg.o vartests.o vputget.o vputgetg.o
> ../liblib/.libs/libnetcdf.so -lm -Wl,-rpath
> -Wl,/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf/lib
> ld: attempted static link of dynamic object `../liblib/.libs/libnetcdf.so'
> make[2]: *** [nctest] Error 1
> make[2]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nctest'
> make[1]: *** [check-am] Error 2
> make[1]: Leaving directory
> `/lustre/ltfs/scratch/Shrinivas.Moorthi/new_netcdf/netcdf-4.1.3/nctest'
> make: *** [check-recursive] Error 1
>
>
Ticket Details
===================
Ticket ID: YAK-227068
Department: Support netCDF
Priority: Normal
Status: Open
