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[netCDF #XCV-291469]: NetCDF 4.1.3 build on Mac OS X 10.7 (Lion)

Greetings Craig!

The issue has to do with a test related to libsz - a fix has recently be added, 
but is only avaliable in the nightly build at this point. Please try using the 
nightly build to see if this fixes the issue:

ftp.unidata.ucar.edu/pub/netcdf/snapshot/netcdf-4-daily.tar.gz

Cheers!

Sean

> Hi,
> 
> I am trying to build NetCDF 4.1.3 on Mac OS X 10.7 (Lion) with the Intel 
> 12.0.4.184 compilers using these settings:
> 
> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
> setenv USR_LOCAL /usr/local
> setenv LIBZ /usr
> setenv HDF5 ${USR_LOCAL}/phdf5
> 
> setenv INCS "-I${HDF5}/include"
> setenv LIBS "-L${HDF5}/lib -lhdf5 -L${LIBZ}/lib -lz"
> 
> setenv NETCDF4 ${USR_LOCAL}/netcdf4
> 
> setenv CPP "cpp -C -P -xassembler-with-cpp -traditional"
> setenv CC mpicc
> setenv CXX mpicxx
> setenv F77 mpif77
> setenv FF mpif77
> setenv FC mpif90
> 
> setenv CPPFLAGS "-DNDEBUG -DpgiFortran"
> setenv CFLAGS "-w -O3 -xHost -ip -fp-model fast=2 -no-prec-div -no-prec-sqrt 
> -ftz -no-multibyte-chars -m64 ${INCS}"
> setenv CXXFLAGS "-w -O3 -xHost -ip -fp-model fast=2 -no-prec-div 
> -no-prec-sqrt -ftz -no-multibyte-chars -m64 ${INCS}"
> setenv FCLAGS "-w -O3 -xHost -ip -fp-model fast=2 -no-heap-arrays 
> -no-prec-div -no-prec-sqrt -ftz -align all -m64 ${INCS}"
> setenv FFLAGS "-w -O3 -xHost -ip -fp-model fast=2 -no-heap-arrays 
> -no-prec-div -no-prec-sqrt -ftz -align all -m64 ${INCS}"
> setenv LDFLAGS "-w -O3 -xHost -ip -fp-model fast=2 -no-heap-arrays 
> -no-prec-div -no-prec-sqrt -ftz -m64 ${LIBS}"
> 
> ./configure --prefix=${NETCDF4} --enable-parallel --with-zlib=/usr/lib 
> --enable-large-file-tests --enable-benchmarks
> 
> make |& tee make.log
> make check |& tee check.log
> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
> 
> It builds fine and all the tests are successful, until it hits this compiler 
> glitch:
> 
> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
> libtool: link: mpif90 -I../fortran -I../f90 -I../f90 -I../include -I../oc -g 
> -w -O3 -xHost -ip -fp-model fast=2 -no-heap-arrays -no-prec-div -no-prec-sqrt 
> -ftz -m64 -o f90tst_vars4 f90tst_vars4.o  -L/usr/local/phdf5/lib 
> -L/usr/local/szip/lib -L/usr/lib ../fortran/.libs/libnetcdff.a 
> /Users/cmattock/Downloads/netcdf-4.1.3/liblib/.libs/libnetcdf.a 
> /usr/local/phdf5/lib/libhdf5_hl.dylib -lcurl 
> /usr/local/phdf5/lib/libhdf5.dylib /usr/local/szip/lib/libsz.dylib -lm -lz
> mpif90  -I../fortran -I../f90 -I../f90 -I../include -I../oc  -g -c -o 
> f90tst_vars2.o  f90tst_vars2.f90
> f90tst_vars2.f90(37): error #6418: This name has already been assigned a data 
> type.   [CACHE_SIZE]
> integer, parameter :: CACHE_SIZE = 8, CACHE_NELEMS = 571, CACHE_PREEMPTION = 
> 66
> ------------------------^
> f90tst_vars2.f90(37): error #6418: This name has already been assigned a data 
> type.   [CACHE_NELEMS]
> integer, parameter :: CACHE_SIZE = 8, CACHE_NELEMS = 571, CACHE_PREEMPTION = 
> 66
> ----------------------------------------^
> f90tst_vars2.f90(77): error #6284: There is no matching specific function for 
> this generic function reference.   [NF90_DEF_VAR]
> call check(nf90_def_var(ncid, VAR5_NAME, NF90_INT, dimids, varid5, chunksizes 
> = chunksizes, &
> -------------^
> f90tst_vars2.f90(85): error #6404: This name does not have a type, and must 
> have an explicit type.   [NF90_SET_VAR_CHUNK_CACHE]
> call check(nf90_set_var_chunk_cache(ncid, varid1, CACHE_SIZE, &
> -------------^
> compilation aborted for f90tst_vars2.f90 (code 1)
> gnumake[2]: *** [f90tst_vars2.o] Error 1
> gnumake[1]: *** [check-am] Error 2
> make: *** [check-recursive] Error 1
> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
> 
> Is this repetitive parameter information coming in through the "use netcdf" 
> import? What is the best way to fix this?
> 
> Thank you!
> Craig
> 
> 


Ticket Details
===================
Ticket ID: XCV-291469
Department: Support netCDF
Priority: Normal
Status: Open