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[netCDF #SIG-623263]: Segmentation fault when fortran code reads netcdf file
- Subject: [netCDF #SIG-623263]: Segmentation fault when fortran code reads netcdf file
- Date: Fri, 28 Jan 2011 12:49:08 -0700
> OS: Suse Sles11
> Compilers (64bit): gcc 4.3.2, gfortran
> Netcdf version 4.1.1
> Compilation steps
>
> > setenv FC gfortran
> > setenv CC gcc
> > configure --disable-cxx --disable-netcdf-4
> > make
> > make check
> > sudo make install
>
> Compilation errors:
>
> gfortran -g -O2 -I/usr/local/include -c ncGrid.f90
> gfortran -g -O2 -I/usr/local/include -c mopnc2etauv.f90
> gfortran -g -O2 -I/usr/local/include -c mopnc2eta.f90
> gfortran -g -O2 -I/usr/local/include -L/usr/local/lib -lnetcdf -o
> mopnc2etauv ncGrid.o mopnc2etauv.o
> ncGrid.o: In function `handle_nf_err':
> /home/turekg/tide_calculator/mopnctrans/ncGrid.f90:136: undefined reference
> to `nf_strerror_'
> ncGrid.o: In function `getgrid':
> /home/turekg/tide_calculator/mopnctrans/ncGrid.f90:109: undefined reference
> to `nf_inq_varid_'
> /home/turekg/tide_calculator/mopnctrans/ncGrid.f90:110: undefined reference
> to `nf_get_var_int_'
> /home/turekg/tide_calculator/mopnctrans/ncGrid.f90:114: undefined reference
> to `nf_inq_varid_'
> /home/turekg/tide_calculator/mopnctrans/ncGrid.f90:115: undefined reference
> to `nf_get_var_real_'
> /home/turekg/tide_calculator/mopnctrans/ncGrid.f90:119: undefined reference
> to `nf_close_'
> ncGrid.o: In function `getdims':
> /home/turekg/tide_calculator/mopnctrans/ncGrid.f90:67: undefined reference to
> `nf_open_'
> /home/turekg/tide_calculator/mopnctrans/ncGrid.f90:72: undefined reference to
> `nf_inq_dimid_'
> /home/turekg/tide_calculator/mopnctrans/ncGrid.f90:74: undefined reference to
> `nf_inq_dimlen_'
> /home/turekg/tide_calculator/mopnctrans/ncGrid.f90:77: undefined reference to
> `nf_inq_dimid_'
> /home/turekg/tide_calculator/mopnctrans/ncGrid.f90:79: undefined reference to
> `nf_inq_dimlen_'
> /home/turekg/tide_calculator/mopnctrans/ncGrid.f90:82: undefined reference to
> `nf_inq_dimid_'
> /home/turekg/tide_calculator/mopnctrans/ncGrid.f90:84: undefined reference to
> `nf_inq_dimlen_'
>
> This is driving me crazy, I have a similar system (but with netcdf compiled
> to support netcd4 and HDF5) where it works fine
> Gaby
>
>
>
>
Howdy Gaby!
Try setting CPPFLAGS=-DgFortran and try again.
Ed
Ticket Details
===================
Ticket ID: SIG-623263
Department: Support netCDF
Priority: Critical
Status: Closed
