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[netCDFPerl #RPN-585546]: help with installation of netCDFPerl

Mateus,

> I'm trying to install netCDFPerl in my system but something is going
> wrong, so I send to you what is asked in SUPPORT section of INSTALL file.
> 
> Thanks for your help.
> 
> Mateus
> 
> 
> A. uname -a
> 
> Linux beagle.dea.inpe.br 2.6.10-1.771_FC2 #1 Mon Mar 28 00:50:14 EST
> 2005 i686 athlon i386 GNU/Linux
> 
> B. contents of file VERSION
> 
> 1.2.3
> 
> C. which cc
> 
> /usr/bin/cc
> 
> D. contents of the "configure.log"
> 
> expanding `include's in file `Makefile'
> expanding `include's in file `perl/Makefile.PL'
> expanding `include's in file `port/master.mk'
> expanding `include's in file `port/Makefile'
> checking for value of perl POLLUTE variable... 0
> checking for neqn... neqn
> checking for tbl... tbl
> checking for C compiler... cc
> checking type of operating system... linux
> checking for tar flags... -chof
> checking for netCDF header-file... -I/usr/local/netCDF-3.6.0/include
> checking for netCDF library... -L/usr/local/netCDF-3.6.0/lib -lnetcdf
> checking for package version... 1.2
> updating cache ./config.cache
> creating ./config.status
> creating Makefile
> creating perl/Makefile.PL
> creating port/master.mk
> creating port/Makefile
> 
> E. contents of the "config.log"
> 
> This file contains any messages produced by compilers while
> running configure, to aid debugging if configure makes a mistake.
> 
> configure:635: checking for manual-page index command
> configure:686: checking for perl utility
> configure:694: checking for perl manual page directory
> configure:712: checking for value of perl POLLUTE variable
> configure:759: checking for neqn
> configure:791: checking for tbl
> configure:1132: checking for C compiler
> configure:1186: checking type of operating system
> configure:1263: checking for tar flags
> configure:1279: checking for netCDF header-file
> configure:1306: checking for netCDF library
> configure:1335: checking for package version
> 
> F. contents of the "makefile.log"
> 
> cd perl && /usr/bin/perl5.8.3 Makefile.PL POLLUTE=0
> Checking if your kit is complete...
> Looks good
> Writing Makefile for NetCDF
> 
> G. contents of the "make.log"
> 
> Please specify prototyping behavior for NetCDF.xs (see perlxs manual)
> c'
> make[2]: Entering directory `/home/mateus/install/netcdf-perl-1.2.3/src'
> 
> making `dynamic' in directory
> /home/mateus/install/netcdf-perl-1.2.3/src/perl
> 
> make[3]: Entering directory
> `/home/mateus/install/netcdf-perl-1.2.3/src/perl'
> /usr/bin/perl5.8.3 /usr/lib/perl5/5.8.3/ExtUtils/xsubpp  -typemap
> /usr/lib/perl5/5.8.3/ExtUtils/typemap  NetCDF.xs > NetCDF.xsc && mv N
> etCDF.xsc NetCDF.c
> gcc -c  -I/usr/local/netCDF-3.6.0/include -D_REENTRANT -D_GNU_SOURCE
> -DTHREADS_HAVE_PIDS -DDEBUGGING -fno-strict-aliasing -I/usr/local/
> include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -I/usr/include/gdbm
> -O2 -g -pipe -march=i386 -mcpu=i686   -DVERSION=\"1.2.3\" -DXS_V
> ERSION=\"1.2.3\" -fPIC
> "-I/usr/lib/perl5/5.8.3/i386-linux-thread-multi/CORE"   NetCDF.c
> Running Mkbootstrap for NetCDF ()
> chmod 644 NetCDF.bs
> rm -f blib/arch/auto/NetCDF/NetCDF.so
> gcc  -shared -L/usr/local/lib NetCDF.o  -o
> blib/arch/auto/NetCDF/NetCDF.so   -L/usr/local/netCDF-3.6.0/lib -lnetcdf
> chmod 755 blib/arch/auto/NetCDF/NetCDF.so
> cp NetCDF.bs blib/arch/auto/NetCDF/NetCDF.bs
> chmod 644 blib/arch/auto/NetCDF/NetCDF.bs
> make[3]: Leaving directory `/home/mateus/install/netcdf-perl-1.2.3/src/perl'
> 
> returning to directory /home/mateus/install/netcdf-perl-1.2.3/src
> 
> make[2]: Leaving directory `/home/mateus/install/netcdf-perl-1.2.3/src'
> make[1]: Leaving directory `/home/mateus/install/netcdf-perl-1.2.3/src'
> test ! -f perl/so_locations || chmod a+w perl/so_locations
> 
> H. contents of the "test.log"
> 
> Can't load 'blib/arch/auto/NetCDF/NetCDF.so' for module NetCDF:
> blib/arch/auto/NetCDF/NetCDF.so: undefined symbol: __mth_i_kcmp at /usr
> /lib/perl5/5.8.3/i386-linux-thread-multi/DynaLoader.pm line 229.
> at test.pl line 5
> Compilation failed in require at test.pl line 5.
> BEGIN failed--compilation aborted at test.pl line 5.
> make[2]: ** [test_dynamic] Erro 255
> make[1]: ** [perl/test] Erro 1
> make: ** [test] Erro 2
> ory `/home/mateus/install/netcdf-perl-1.2.3/src/perl'
> make[1]: Leaving directory `/home/mateus/install/netcdf-perl-1.2.3/src'

It appears that the netCDF-Perl package built correctly but that
it can't be used because it can't find a referenced symbol at run-
time.

It could be that the environment used to build either the netCDF-Perl
module or the netCDF library is incompatible with the environment used 
to build the perl(1) utility.  In general, they all must be the same
environment.

What is the output of the command "perl -V"?  How does that environment
differ from the environment used to build the netCDF package and the
netCDF-Perl package?

Regards,
Steve Emmerson

Ticket Details
===================
Ticket ID: RPN-585546
Department: Support netCDF Perl
Priority: Normal
Status: Closed