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20010314: Installation of NetCDF-perl-1.2.1
- Subject: 20010314: Installation of NetCDF-perl-1.2.1
- Date: Wed, 14 Mar 2001 09:04:43 -0700
Alford,
>Date: Wed, 14 Mar 2001 09:26:24 -0600
>From: "Alford, Glennette R" <address@hidden>
>Organization: US/Navy
>To: "'Steve Emmerson'" <address@hidden>
>Subject: RE: 20010313: Installation of NetCDF-perl-1.2.1
>Keywords: 200103131940.f2DJeZL13393
The above message contained the following:
> blib/arch/auto/NetCDF/NetCDF.so:=0A=
> =0A=
> [Index] Value Size Type Bind Other Shndx Name=0A=
> =0A=
> [360] | 0| 0|FUNC |GLOB |0 |UNDEF |.umul=0A=
> [455] | 0| 0|NOTY |GLOB |0 |UNDEF =
> |PL_markstack_ptr=0A=
> [399] | 0| 0|NOTY |GLOB |0 |UNDEF |PL_na=0A=
> [422] | 0| 0|NOTY |GLOB |0 |UNDEF |PL_stack_base=0A=
> [375] | 0| 0|NOTY |GLOB |0 |UNDEF |PL_stack_max=0A=
> [416] | 0| 0|NOTY |GLOB |0 |UNDEF |PL_stack_sp=0A=
> [461] | 0| 0|NOTY |GLOB |0 |UNDEF |PL_sv_yes=0A=
> [389] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_av_clear=0A=
> [371] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_av_fetch=0A=
> [402] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_av_len=0A=
> [434] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_av_pop=0A=
> [403] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_av_push=0A=
> [358] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_av_undef=0A=
> [450] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_croak=0A=
> [459] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_form=0A=
> [327] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_newAV=0A=
> [352] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_newRV=0A=
> [431] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_newSViv=0A=
> [423] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_newSVnv=0A=
> [417] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_newSVpv=0A=
> [330] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_newXS=0A=
> [409] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_stack_grow=0A=
> [376] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_sv_2iv=0A=
> [334] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_sv_2mortal=0A=
> [386] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_sv_2nv=0A=
> [460] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_sv_2pv=0A=
> [372] | 0| 0|NOTY |GLOB |0 |UNDEF =
> |Perl_sv_newmortal=0A=
> [393] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_sv_setiv=0A=
> [379] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_sv_setnv=0A=
> [373] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_sv_setpv=0A=
> [442] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_sv_setpvn=0A=
> [366] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_sv_setsv=0A=
> [362] | 0| 0|NOTY |GLOB |0 |UNDEF |Perl_warn=0A=
> [355] | 25660| 280|FUNC |GLOB |0 |9 |XS_NetCDF_abort=0A=
> [452] | 35204| 700|FUNC |GLOB |0 |9 =
> |XS_NetCDF_attcopy=0A=
> [364] | 37096| 508|FUNC |GLOB |0 |9 =
> |XS_NetCDF_attdel=0A=
> [345] | 34544| 660|FUNC |GLOB |0 |9 =
> |XS_NetCDF_attget=0A=
> [436] | 33912| 632|FUNC |GLOB |0 |9 =
> |XS_NetCDF_attinq=0A=
> [458] | 35904| 556|FUNC |GLOB |0 |9 =
> |XS_NetCDF_attname=0A=
> [419] | 32760| 1152|FUNC |GLOB |0 |9 =
> |XS_NetCDF_attput=0A=
> [405] | 36460| 636|FUNC |GLOB |0 |9 =
> |XS_NetCDF_attrename=0A=
> [333] | 24600| 280|FUNC |GLOB |0 |9 |XS_NetCDF_close=0A=
> [380] | 22788| 428|FUNC |GLOB |0 |9 =
> |XS_NetCDF_constant=0A=
> [370] | 23216| 412|FUNC |GLOB |0 |9 =
> |XS_NetCDF_create=0A=
> [384] | 26320| 508|FUNC |GLOB |0 |9 =
> |XS_NetCDF_dimdef=0A=
> [404] | 26828| 412|FUNC |GLOB |0 |9 |XS_NetCDF_dimid=0A=
> [449] | 27240| 508|FUNC |GLOB |0 |9 =
> |XS_NetCDF_diminq=0A=
> [369] | 27748| 508|FUNC |GLOB |0 |9 =
> |XS_NetCDF_dimrename=0A=
> [385] | 24320| 280|FUNC |GLOB |0 |9 |XS_NetCDF_endef=0A=
> [353] | 39652| 208|FUNC |GLOB |0 |9 |XS_NetCDF_err=0A=
> [400] | 39860| 476|FUNC |GLOB |0 |9 |XS_NetCDF_foo=0A=
> [394] | 40336| 268|FUNC |GLOB |0 |9 |XS_NetCDF_foo2=0A=
> [395] | 40604| 240|FUNC |GLOB |0 |9 |XS_NetCDF_foo3=0A=
> [397] | 40844| 312|FUNC |GLOB |0 |9 |XS_NetCDF_foo4=0A=
> [398] | 41156| 324|FUNC |GLOB |0 |9 |XS_NetCDF_foo5=0A=
> [421] | 24880| 500|FUNC |GLOB |0 |9 =
> |XS_NetCDF_inquire=0A=
> [377] | 23628| 412|FUNC |GLOB |0 |9 |XS_NetCDF_open=0A=
> [346] | 39356| 296|FUNC |GLOB |0 |9 |XS_NetCDF_opts=0A=
> [448] | 38060| 468|FUNC |GLOB |0 |9 =
> |XS_NetCDF_recget=0A=
> [390] | 38528| 548|FUNC |GLOB |0 |9 =
> |XS_NetCDF_recinq=0A=
> [347] | 37604| 456|FUNC |GLOB |0 |9 =
> |XS_NetCDF_recput=0A=
> [429] | 24040| 280|FUNC |GLOB |0 |9 |XS_NetCDF_redef=0A=
> [454] | 25940| 380|FUNC |GLOB |0 |9 =
> |XS_NetCDF_setfill=0A=
> [363] | 25380| 280|FUNC |GLOB |0 |9 |XS_NetCDF_sync=0A=
> [337] | 39076| 280|FUNC |GLOB |0 |9 =
> |XS_NetCDF_typelen=0A=
> [349] | 28256| 588|FUNC |GLOB |0 |9 =
> |XS_NetCDF_vardef=0A=
> [324] | 31600| 652|FUNC |GLOB |0 |9 =
> |XS_NetCDF_varget=0A=
> [326] | 30460| 544|FUNC |GLOB |0 |9 =
> |XS_NetCDF_varget1=0A=
> [378] | 28844| 412|FUNC |GLOB |0 |9 |XS_NetCDF_varid=0A=
> [412] | 29256| 676|FUNC |GLOB |0 |9 =
> |XS_NetCDF_varinq=0A=
> [388] | 31004| 596|FUNC |GLOB |0 |9 =
> |XS_NetCDF_varput=0A=
> [365] | 29932| 528|FUNC |GLOB |0 |9 =
> |XS_NetCDF_varput1=0A=
> [441] | 32252| 508|FUNC |GLOB |0 |9 =
> |XS_NetCDF_varrename=0A=
> [381] | 116196| 0|OBJT |GLOB |0 |15 |_DYNAMIC=0A=
> [344] | 114032| 0|OBJT |GLOB |0 |13 =
> |_GLOBAL_OFFSET_TABLE_=0A=
> [433] | 115220| 0|OBJT |GLOB |0 |14 =
> |_PROCEDURE_LINKAGE_TABLE_=0A=
> [426] | 0| 0|NOTY |WEAK |0 |UNDEF =
> |__deregister_frame_info=0A=
> [343] | 0| 0|FUNC |GLOB |0 |UNDEF |__flsbuf=0A=
> [387] | 0| 0|OBJT |GLOB |0 |UNDEF |__iob=0A=
> [342] | 0| 0|NOTY |WEAK |0 |UNDEF =
> |__register_frame_info=0A=
> [432] | 116408| 0|OBJT |GLOB |0 |19 |_edata=0A=
> [338] | 116832| 0|OBJT |GLOB |0 |20 |_end=0A=
> [336] | 0| 0|OBJT |GLOB |0 |UNDEF |_environ=0A=
> [439] | 48493| 0|OBJT |GLOB |0 |12 |_etext=0A=
> [406] | 0| 0|FUNC |GLOB |0 |UNDEF |_exit=0A=
> [451] | 43580| 20|FUNC |GLOB |0 |11 |_fini=0A=
> [359] | 43552| 28|FUNC |GLOB |0 |10 |_init=0A=
> [440] | 43600| 4|OBJT |GLOB |0 |12 |_lib_version=0A=
> [325] | 12052| 116|FUNC |GLOB |0 |9 |_start=0A=
> [350] | 0| 0|FUNC |GLOB |0 |UNDEF |atexit=0A=
> [401] | 41480| 1972|FUNC |GLOB |0 |9 |boot_NetCDF=0A=
> [413] | 0| 0|OBJT |GLOB |0 |UNDEF |errno=0A=
> [351] | 0| 0|FUNC |GLOB |0 |UNDEF |exit=0A=
> [456] | 0| 0|FUNC |GLOB |0 |UNDEF |fprintf=0A=
> [361] | 0| 0|FUNC |GLOB |0 |UNDEF |fputs=0A=
> [418] | 0| 0|FUNC |GLOB |0 |UNDEF |free=0A=
> [444] | 0| 0|NOTY |GLOB |0 |UNDEF |main=0A=
> [356] | 0| 0|FUNC |GLOB |0 |UNDEF |malloc=0A=
> [446] | 0| 0|FUNC |GLOB |0 |UNDEF |memcpy=0A=
> [348] | 0| 0|NOTY |GLOB |0 |UNDEF |ncabort=0A=
> [340] | 0| 0|NOTY |GLOB |0 |UNDEF |ncattcopy=0A=
> [383] | 0| 0|NOTY |GLOB |0 |UNDEF |ncattdel=0A=
> [407] | 0| 0|NOTY |GLOB |0 |UNDEF |ncattget=0A=
> [354] | 0| 0|NOTY |GLOB |0 |UNDEF |ncattinq=0A=
> [438] | 0| 0|NOTY |GLOB |0 |UNDEF |ncattname=0A=
> [341] | 0| 0|NOTY |GLOB |0 |UNDEF |ncattput=0A=
> [435] | 0| 0|NOTY |GLOB |0 |UNDEF |ncattrename=0A=
> [424] | 0| 0|NOTY |GLOB |0 |UNDEF |ncclose=0A=
> [411] | 0| 0|NOTY |GLOB |0 |UNDEF |nccreate=0A=
> [357] | 0| 0|NOTY |GLOB |0 |UNDEF |ncdimdef=0A=
> [410] | 0| 0|NOTY |GLOB |0 |UNDEF |ncdimid=0A=
> [329] | 0| 0|NOTY |GLOB |0 |UNDEF |ncdiminq=0A=
> [453] | 0| 0|NOTY |GLOB |0 |UNDEF |ncdimrename=0A=
> [415] | 0| 0|NOTY |GLOB |0 |UNDEF |ncendef=0A=
> [331] | 0| 0|NOTY |GLOB |0 |UNDEF |ncerr=0A=
> [391] | 0| 0|NOTY |GLOB |0 |UNDEF |ncinquire=0A=
> [374] | 0| 0|NOTY |GLOB |0 |UNDEF |ncopen=0A=
> [420] | 0| 0|NOTY |GLOB |0 |UNDEF |ncopts=0A=
...
The last line above indicates that the "ncopt" symbol is not defined in
the shared library. Recall that the inability to find this symbol is
the cause of your problem.
From the above, I see that NONE of the netCDF functions are contained in
the shared library. This indicates a failure to build the shared library
correctly.
It is possible that the reason for this failure is that
the netCDF library itself (whose pathname, I presume, is
"/usr/local/lib/libnetcdf.a") doesn't contain position-independent code
(i.e. code compiled by gcc using the "-fPIC" option). Is there some way
you could verify this?
Regards,
Steve Emmerson <http://www.unidata.ucar.edu>
