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[netCDF #NYG-547290]: problems building ncdf4 with hdf5
- Subject: [netCDF #NYG-547290]: problems building ncdf4 with hdf5
- Date: Thu, 22 Jun 2017 11:41:06 -0600
Hello,
If netCDF installed properly and did not result in any errors, you may need to
contact the CICE CICE support and ask them for help getting it to configure
with netCDF. I'm afraid I don't have any experience with CICE, and do not see
any errors in your email so I cannot try to diagnose it.
I'm sorry I can't be of more immediate help,
-Ward
> Dear I am going to instal Sea Ice Model called (CICE CICE ) I have installed
> HDF5 using intel compiler and this instruction:Building HDF5* with Intel®
> compilers | Intel® Software
>
>
> |
> | |
> Building HDF5* with Intel® compilers | Intel® Software
> A guide to help Intel® compiler customers build and use the HDF5 library: a
> general purpose library and associat... | |
>
> |
>
>
> and HDF4 using this :[netCDF #NYG-547290]: problems building ncdf4 with hdf5
>
>
> |
> | |
> [netCDF #NYG-547290]: problems building ncdf4 with hdf5
> | |
>
> |
>
>
> after that again using intel I have compiled netcdf, it went smoothly and
> passed all the tests. here you can see my config
> :CPPFLAGS="-I${H5DIR}/include -I${H4DIR}/include -I/opt/include"
> LDFLAGS="-L${H5DIR}/lib -L${H4DIR}/lib -L/opt/lib" ./configure --enable-hdf4
> --enable-hdf4-file-tests --prefix=/usr/local/netcdf441_Intel2/
> HDF5DIR=/usr/local/hdf5110_Intelthen when I tried to compile CICE code and I
> have got this error:
> icc -E -P -traditional -DLINUX -DNXGLOB=100 -DNYGLOB=116 -DBLCKX=5 -DBLCKY=5
> -DMXBLCKS=464 -DNICELYR=7 -DNSNWLYR=1 -DNICECAT=5 -DTRAGE=1 -DTRFY=1
> -DTRLVL=1 -DTRPND=1 -DTRBRI=0 -DNTRAERO=0 -DNBGCLYR=7 -DTRBGCS=0 -DNUMIN=11
> -DNUMAX=99 -Dncdf -I. -I/home/we/CICE512/drivers/cice
> -I/home/we/CICE512/source -I/home/we/CICE512/serial
> -I/home/we/CICE512/io_netcdf -I/home/we/CICE512/csm_share -I. -I/usr/include
> -I/usr/local/netcdf441_Intel2/include -I/usr/local/netcdf441_Intel2/include
> /home/we/CICE512/source/ice_read_write.F90 > ice_read_write.f90ifort -c -r8
> -i4 -O2 -align all -w -ftz -convert big_endian -assume byterecl -fp-model
> precise -I. -I/home/we/CICE512/drivers/cice -I/home/we/CICE512/source
> -I/home/we/CICE512/serial -I/home/we/CICE512/io_netcdf
> -I/home/we/CICE512/csm_share -I. -I/usr/include
> -I/usr/local/netcdf441_Intel2/include -I/usr/local/netcdf441_Intel2/include
> ice_read_write.f90 ice_read_write.f90(37): error #7002: Error in opening
> the compiled module
file. Check INCLUDE paths. [NETCDF] use netcdf
----------^ice_read_write.f90(1024): error #6404: This name does not have a
type, and must have an explicit type. [NF90_NOWRITE] status =
nf90_open(filename, NF90_NOWRITE,
fid)---------------------------------------^ice_read_write.f90(1024): error
#6404: This name does not have a type, and must have an explicit type.
[NF90_OPEN] status = nf90_open(filename, NF90_NOWRITE,
fid)-------------------^ice_read_write.f90(1025): error #6404: This name does
not have a type, and must have an explicit type. [NF90_NOERR] if
(status /= nf90_noerr) then------------------------^ice_read_write.f90(1115):
error #6404: This name does not have a type, and must have an explicit type.
[NF90_INQ_VARID] status = nf90_inq_varid(fid, trim(varname),
varid)------------------^ice_read_write.f90(1127): error #6632: Keyword
arguments are invalid without an explicit interf
ace. [START] start=(/1,1,nrec/), &
---------------^ice_read_write.f90(1128): error #6632: Keyword arguments are
invalid without an explicit interface. [COUNT]
count=(/nx,ny,1/) )---------------^ice_read_write.f90(1126): error #6404: This
name does not have a type, and must have an explicit type. [NF90_GET_VAR]
status = nf90_get_var( fid, varid, work_g1,
&------------------^ice_read_write.f90(1257): error #6404: This name does not
have a type, and must have an explicit type. [NF90_INQ_VARID] status
= nf90_inq_varid(fid, trim(varname),
varid)------------------^ice_read_write.f90(1269): error #6632: Keyword
arguments are invalid without an explicit interface. [START]
start=(/1,1,1,nrec/), & ---------------^ice_read_write.f90(1270): error #6632:
Keyword arguments are invalid without an explicit interface. [COUNT]
count=(/nx,ny,ncat,1/) )----------
-----^ice_read_write.f90(1268): error #6404: This name does not have a type,
and must have an explicit type. [NF90_GET_VAR] status = nf90_get_var(
fid, varid, work_g1, &------------------^ice_read_write.f90(1375): error #6404:
This name does not have a type, and must have an explicit type.
[NF90_INQ_VARID] status = nf90_inq_varid(fid, trim(varname),
varid)------------------^ice_read_write.f90(1387): error #6632: Keyword
arguments are invalid without an explicit interface. [START]
start= (/ nrec /), & ---------------^ice_read_write.f90(1388): error #6632:
Keyword arguments are invalid without an explicit interface. [COUNT]
count=(/ 1 /) )---------------^ice_read_write.f90(1386): error #6404: This
name does not have a type, and must have an explicit type. [NF90_GET_VAR]
status = nf90_get_var(fid, varid, workg, &
------------------^ice_read_write.f90(1404): error #6632: Keyword a
rguments are invalid without an explicit interface. [NDIMENSIONS]
status = nf90_inquire(fid, nDimensions=ndim,
nVariables=nvar)-------------------------------------^ice_read_write.f90(1404):
error #6632: Keyword arguments are invalid without an explicit interface.
[NVARIABLES] status = nf90_inquire(fid, nDimensions=ndim,
nVariables=nvar)-------------------------------------------------------^ice_read_write.f90(1404):
error #6404: This name does not have a type, and must have an explicit type.
[NF90_INQUIRE] status = nf90_inquire(fid, nDimensions=ndim,
nVariables=nvar)-------------------^ice_read_write.f90(1407): error #6632:
Keyword arguments are invalid without an explicit interface. [NAME]
status =
nf90_inquire_dimension(fid,id,name=dimname,len=dimlen)---------------------------------------------------^ice_read_write.f90(1407):
error #6632: Keyword arguments are invalid without an explicit interface.
[LEN] status =
nf90_inquire_dimension(fid,id,name=dimname,len=dimlen)----------------------------------------------------------------^ice_read_write.f90(1407):
error #6404: This name does not have a type, and must have an explicit type.
[NF90_INQUIRE_DIMENSION] status =
nf90_inquire_dimension(fid,id,name=dimname,len=dimlen)---------------------^ice_read_write.f90(1468):
error #6404: This name does not have a type, and must have an explicit type.
[NF90_INQ_VARID] status = nf90_inq_varid(fid, trim(varname),
varid)------------------^ice_read_write.f90(1480): error #6632: Keyword
arguments are invalid without an explicit interface. [START]
start=(/1,nrec/), & ---------------^ice_read_write.f90(1481): error #6632:
Keyword arguments are invalid without an explicit interface. [COUNT]
count=(/nilyr,1/) )---------------^ice_read_write.f90(1479): error #6404:
This name does not hav
e a type, and must have an explicit type. [NF90_GET_VAR] status =
nf90_get_var( fid, varid, work_z, &------------------^ice_read_write.f90(1493):
error #6632: Keyword arguments are invalid without an explicit interface.
[NDIMENSIONS] status = nf90_inquire(fid, nDimensions=ndim,
nVariables=nvar)-------------------------------------^ice_read_write.f90(1493):
error #6632: Keyword arguments are invalid without an explicit interface.
[NVARIABLES] status = nf90_inquire(fid, nDimensions=ndim,
nVariables=nvar)-------------------------------------------------------^ice_read_write.f90(1493):
error #6404: This name does not have a type, and must have an explicit type.
[NF90_INQUIRE] status = nf90_inquire(fid, nDimensions=ndim,
nVariables=nvar)-------------------^ice_read_write.f90(1496): error #6632:
Keyword arguments are invalid without an explicit interface. [NAME]
status = nf90_inquire_dimension(f
id,id,name=dimname,len=dimlen)---------------------------------------------------^ice_read_write.f90(1847):
catastrophic error: Too many errors, exitingcompilation aborted for
ice_read_write.f90 (code 1)/home/we/CICE512/bld/Makefile:121: recipe for target
'ice_read_write.o' failedgmake: *** [ice_read_write.o] Error 1
> I should mention that without Netcdf, my CICE code compiled without error and
> here is the output of env:
> MKLROOT=/opt/intel/compilers_and_libraries_2017.4.196/linux/mklMANPATH=/opt/intel/man/common:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/man:/opt/intel/documentation_2017/en/debugger//gdb-ia/man/:/opt/intel/documentation_2017/en/debugger//gdb-mic/man/:/opt/intel/documentation_2017/en/debugger//gdb-igfx/man/:/opt/intel/man/common:/opt/intel/documentation_2017/en/debugger//gdb-ia/man/:/opt/intel/documentation_2017/en/debugger//gdb-mic/man/:/opt/intel/documentation_2017/en/debugger//gdb-igfx/man/:/opt/intel/man/common:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/man:/opt/intel/documentation_2017/en/debugger//gdb-ia/man/:/opt/intel/documentation_2017/en/debugger//gdb-mic/man/:/opt/intel/documentation_2017/en/debugger//gdb-igfx/man/:/opt/intel/man/common:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/man:/opt/intel/documentation_2017/en/debugger//gdb-ia/man/:/opt/intel/documentation_2017/en/debugger//gdb-mic/man/:/opt/intel/documentation_2017/en/d
ebugger//gdb-igfx/man/::/opt/pgi/linux86-64/17.4/man::::INTEL_LICENSE_FILE=/opt/intel/compilers_and_libraries_2017.4.196/linux/licenses:/opt/intel/licenses:/home/we/intel/licenses:/opt/intel/compilers_and_libraries_2017.4.196/linux/licenses:/opt/intel/licenses:/home/we/intel/licenses:/opt/intel/compilers_and_libraries_2017.4.196/linux/licenses:/opt/intel/licenses:/home/we/intel/licenses:/opt/intel/compilers_and_libraries_2017.4.196/linux/licenses:/opt/intel/licenses:/home/we/intel/licensesIPPROOT=/opt/intel/compilers_and_libraries_2017.4.196/linux/ippSHELL=/bin/bashTERM=xterm-256colorGDBSERVER_MIC=/opt/intel/debugger_2017/gdb/targets/mic/bin/gdbserverLIBRARY_PATH=/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_
libraries_2017.4.196/linux/daal/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/lib/ia32:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/ia32_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/ia32_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/ia32/gcc4.7:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/lib/ia32_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/intel64_lin:/opt/inte
l/compilers_and_libraries_2017.4.196/linux/tbb/lib/intel64/gcc4.7:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/../tbb/lib/intel64_lin/gcc4.4MIC_LD_LIBRARY_PATH=/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/li
nux/mkl/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/micUSER=rootLD_LIBRARY_PATH=/opt/intel/compilers_and_libraries_20
17.4.196/linux/compiler/lib/intel64:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/intel64/gcc4.7:/opt/intel/debugger_2017/iga/lib:/opt/intel/debugger_2017/libipt/intel64/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/ia32:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/ia32_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/lib/ia32:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/ia32_lin:/opt/intel/compiler
s_and_libraries_2017.4.196/linux/mkl/lib/ia32_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/ia32/gcc4.7:/opt/intel/debugger_2017/iga/lib:/opt/intel/debugger_2017/libipt/intel64/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/lib/ia32_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/intel64/gcc4.7:/opt/intel/debugger_2017/iga/lib:/opt/intel/debugger_2017/libipt/intel64/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/lib/intel64_
lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/intel64/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/lib/intel64:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/intel64/gcc4.7:/opt/intel/debugger_2017/iga/lib:/opt/intel/debugger_2017/libipt/intel64/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/lib/intel64_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/../tbb/lib/intel64_lin/gcc4.4:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpirt/lib/ia32_lin:/usr/local/lib/LS_COLORS=rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;0
1:or=40;31;01:mi=00:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arc=01;31:*.arj=01;31:*.taz=01;31:*.lha=01;31:*.lz4=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.tzo=01;31:*.t7z=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lrz=01;31:*.lz=01;31:*.lzo=01;31:*.xz=01;31:*.bz2=01;31:*.bz=01;31:*.tbz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.war=01;31:*.ear=01;31:*.sar=01;31:*.rar=01;31:*.alz=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.cab=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.webm=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;3
5:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=00;36:*.au=00;36:*.flac=00;36:*.m4a=00;36:*.mid=00;36:*.midi=00;36:*.mka=00;36:*.mp3=00;36:*.mpc=00;36:*.ogg=00;36:*.ra=00;36:*.wav=00;36:*.oga=00;36:*.opus=00;36:*.spx=00;36:*.xspf=00;36:SUDO_USER=weSUDO_UID=1000MIC_LIBRARY_PATH=/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4
.196/linux/mkl/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/mic/lib:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/intel64_lin_mic:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/lib/micCPATH=/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/include:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/include:/opt/intel/compilers_and_libraries_2017.4.196/lin
ux/tbb/include:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/include:/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/include:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/include:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/include:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/include:/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/include:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/include:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/include:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/include:/opt/intel/compilers_and_libraries_2017.4.196/linux/ipp/include:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/include:/opt/intel/compilers_and_libraries_2017.4.196/linux/tbb/include:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/includeUSERNAME=rootNLSPATH=/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libr
aries_2017.4.196/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2017/gdb/intel64_mic/share/locale/%l_%t/%N:/opt/intel/debugger_2017/gdb/intel64/share/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/ia32/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/ia32_lin/locale/%l_%t/%N:/opt/intel/debugger_2017/gdb/intel64_mic/share/locale/%l_%t/%N:/opt/intel/debugger_2017/gdb/intel64/share/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2017/gdb/intel64_mic/share/locale/%l_%t/%N:/opt/intel/debugger_2017/gdb/intel64/share/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2017.4.196/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2017.4.196/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2017/gdb/intel64_mi
c/share/locale/%l_%t/%N:/opt/intel/debugger_2017/gdb/intel64/share/locale/%l_%t/%NPGI=/opt/pgiMAIL=/var/mail/rootPATH=/home/linuxbrew/.linuxbrew/bin:/home/we/anaconda3/bin:/opt/intel/compilers_and_libraries_2017.4.196/linux/bin/intel64:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/intel64/bin:/opt/intel/debugger_2017/gdb/intel64_mic/bin:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpirt/bin/ia32_lin:/opt/intel/compilers_and_libraries_2017.4.196/linux/bin/ia32:/opt/intel/debugger_2017/gdb/intel64_mic/bin:/opt/intel/compilers_and_libraries_2017.4.196/linux/bin/intel64:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/intel64/bin:/opt/intel/debugger_2017/gdb/intel64_mic/bin:/opt/intel/compilers_and_libraries_2017.4.196/linux/bin/intel64:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/intel64/bin:/opt/intel/debugger_2017/gdb/intel64_mic/bin:/opt/pgi/linux86-64/17.4/bin:/usr/local:/usr/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
:/snap/bin:/home/we/.local/binTBBROOT=/opt/intel/compilers_and_libraries_2017.4.196/linux/tbbPWD=/home/we/CICE512GDB_CROSS=/opt/intel/debugger_2017/gdb/intel64_mic/bin/gdb-micLANG=en_CA.UTF-8DAALROOT=/opt/intel/compilers_and_libraries_2017.4.196/linux/daalLM_LICENSE_FILE=:/opt/pgi/license.datMPM_LAUNCHER=/opt/intel/debugger_2017/mpm/mic/bin/start_mpm.shINTEL_PYTHONHOME=/opt/intel/debugger_2017/python/intel64/SHLVL=1SUDO_COMMAND=/bin/bashHOME=/home/weLANGUAGE=en_CA:enH5DIR=/usr/local/hdf5110_IntelLOGNAME=rootCLASSPATH=/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/intel64/lib/mpi.jar:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/lib/daal.jar:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/lib/daal.jar:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/intel64/lib/mpi.jar:/opt/intel/compilers_and_libraries_2017.4.196/linux/daal/lib/daal.jar:/opt/intel/compilers_and_libraries_2017.4.196/linux/mpi/intel64/lib/mpi.jar:/opt/intel/compilers_and_lib
raries_2017.4.196/linux/daal/lib/daal.jarLESSOPEN=| /usr/bin/lesspipe
%sINFOPATH=/opt/intel/documentation_2017/en/debugger//gdb-ia/info/:/opt/intel/documentation_2017/en/debugger//gdb-mic/info/:/opt/intel/documentation_2017/en/debugger//gdb-igfx/info/:/opt/intel/documentation_2017/en/debugger//gdb-ia/info/:/opt/intel/documentation_2017/en/debugger//gdb-mic/info/:/opt/intel/documentation_2017/en/debugger//gdb-igfx/info/:/opt/intel/documentation_2017/en/debugger//gdb-ia/info/:/opt/intel/documentation_2017/en/debugger//gdb-mic/info/:/opt/intel/documentation_2017/en/debugger//gdb-igfx/info/:/opt/intel/documentation_2017/en/debugger//gdb-ia/info/:/opt/intel/documentation_2017/en/debugger//gdb-mic/info/:/opt/intel/documentation_2017/en/debugger//gdb-igfx/info/H4DIR=/usr/local/hdf4_IntelSUDO_GID=1000DISPLAY=:0LESSCLOSE=/usr/bin/lesspipe
%s
%sI_MPI_ROOT=/opt/intel/compilers_and_libraries_2017.4.196/linux/mpiXAUTHORITY=/home/we/.Xauthority_=/usr/bin/env
> And I have set this libraries in the CICE make file:
> INCLDIR := -I. -I/usr/include -I/usr/local/netcdf441_Intel2/includeSLIBS
> := -L/usr/lib -L/usr/local/netcdf441_Intel2/lib
> What is my mistake ?
>
>
> |
> |
> |
> | | |
>
> |
>
> |
> |
> | |
> CICE
> | |
>
> |
>
> |
>
>
> Moein Zohary
>
Ticket Details
===================
Ticket ID: NYG-547290
Department: Support netCDF
Priority: Normal
Status: Closed
===================
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