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[netCDF #YBM-254849]: installation problems

Hello Judy,

You aren't missing anything obvious that I can see.  Normally, I would have you 
check your LD_LIBRARY_PATH, but you've already done that (I presume the intel 
fortran compiler libraries are installed in one of the directories present in 
your LD_LIBRARY_PATH).

Regarding the error about nc_open_mem; that could be caused by using an older 
netCDF-C, as nc_open_mem is a relatively new function as of netCDF-C 4.4.0.  
What version are you using?  We've also encountered situations where an old 
libnetcdf that is present in the system (/usr/local/lib, /usr/lib) instead of 
the newer copy in a non-standard location.

If you can provide the config.log generated when you ran configure, I can try 
to see if there is any information captured therein.  Additionally, if you can 
provide more information about your netCDF-C installation, I will see if that 
tells us anything as well.

Thanks, have a great day,

-Ward

> Full Name: Judy Gaukel
> Email Address: address@hidden
> Organization: Scripps Institution of Oceanography
> Package Version: netCDF-Fortran 4.4.4
> Operating System: CentOS
> Hardware: Linux hunter 3.10.0-327.13.1.el7.x86_64
> Description of problem: $echo $LD_LIBRARY_PATH
> /usr/local/lib:/usr/local/lib:/opt/intel/composer_xe_2011_sp1.9.293/compiler/lib/intel64:/opt/intel/composer_xe_2011_sp1.9.293/ipp/../compiler/lib/intel64:/opt/intel/composer_xe_2011_sp1.9.293/ipp/lib/intel64:/opt/intel/composer_xe_2011_sp1.9.293/compiler/lib/intel64:/opt/intel/composer_xe_2011_sp1.9.293/mkl/lib/intel64:/opt/intel/composer_xe_2011_sp1.9.293/tbb/lib/intel64//cc4.1.0_libc2.4_kernel2.6.16.21:/opt/intel/composer_xe_2011_sp1.9.293/debugger/lib/intel64:/opt/intel/composer_xe_2011_sp1.9.293/mpirt/lib/intel64
> 
> Configure and make run OK, but "make check" does not.
> make[2]: Entering directory `/usr/local/netcdf-fortran-4.4.4/nf_test'
> /bin/sh ../libtool  --tag=F77   --mode=link ifort -I../fortran   -I../fortran 
> -g   -o nf_test f03lib_f_interfaces.o test_get.o test_put.o nf_error.o 
> nf_test.o test_read.o test_write.o util.o f03lib.o ../fortran/libnetcdff.la 
> -lnetcdf
> libtool: link: ifort -I../fortran -I../fortran -g -o .libs/nf_test 
> f03lib_f_interfaces.o test_get.o test_put.o nf_error.o nf_test.o test_read.o 
> test_write.o util.o f03lib.o  ../fortran/.libs/libnetcdff.so -lnetcdf 
> -Wl,-rpath -Wl,/usr/local/lib
> ld: warning: libifport.so.5, needed by ../fortran/.libs/libnetcdff.so, not 
> found (try using -rpath or -rpath-link)
> ld: warning: libifcore.so.5, needed by ../fortran/.libs/libnetcdff.so, not 
> found (try using -rpath or -rpath-link)
> ld: warning: libimf.so, needed by ../fortran/.libs/libnetcdff.so, not found 
> (try using -rpath or -rpath-link)
> ld: warning: libsvml.so, needed by ../fortran/.libs/libnetcdff.so, not found 
> (try using -rpath or -rpath-link)
> ld: warning: libintlc.so.5, needed by ../fortran/.libs/libnetcdff.so, not 
> found (try using -rpath or -rpath-link)
> ../fortran/.libs/libnetcdff.so: undefined reference to `nc_open_mem'
> make[2]: *** [nf_test] Error 1
> make[2]: Leaving directory `/usr/local/netcdf-fortran-4.4.4/nf_test'
> make[1]: *** [check-am] Error 2
> 
> nf-config --all
> 
> This netCDF-Fortran 4.4.4 has been built with the following features:
> 
> --cc        -> gcc
> --cflags    ->  -I/usr/local/include
> 
> --fc        -> ifort
> --fflags    -> -I/usr/local/include
> --flibs     -> -L/usr/local/lib -lnetcdff  -lnetcdf -lnetcdf
> --has-f90   -> no
> --has-f03   -> yes
> 
> --has-nc2   -> yes
> --has-nc4   -> yes
> 
> --prefix    -> /usr/local
> --includedir-> /usr/local/include
> --version   -> netCDF-Fortran 4.4.4
> 
> I've uninstalled and reinstalled and am consistently getting this same error. 
>  Here's my configure command:
> sudo ./configure FC=ifort F77=ifort FCFLAGS='-O3 -xHost -ip -no-prec-div 
> -static-intel'
> 
> Am I missing something obvious?  Thank you for any help.  I did install 
> netcdf-c.  I've exported variables, read all the installation instructions I 
> can find, and still can't seem to get the library to be found even though 
> it's all there...
> Thanks for any help.
> 
> 

Ticket Details
===================
Ticket ID: YBM-254849
Department: Support netCDF
Priority: Normal
Status: Closed
===================
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