The document type definition is now external and points to: http://www.unidata.ucar.edu/schemas/thredds/dtd/ncwms/wmsConfig.dtd
So, the internal document type declaration has to be changed from:
<!DOCTYPE wmsConfig [
<!ELEMENT wmsConfig (global, overrides?)>
<!ELEMENT global (defaults, standardNames?)>
<!ELEMENT defaults (allowFeatureInfo, defaultColorScaleRange, defaultPaletteName, defaultNumColorBands, logScaling)>
<!ELEMENT standardNames (standardName*)>
<!ELEMENT standardName (defaultColorScaleRange?, defaultPaletteName?, defaultNumColorBands?, logScaling?)>
<!ATTLIST standardName name CDATA #REQUIRED>
<!ATTLIST standardName units CDATA #REQUIRED>
<!ELEMENT overrides (datasetPath*)>
<!ELEMENT datasetPath (pathDefaults?, variables?)>
<!ATTLIST datasetPath pathSpec CDATA #REQUIRED>
<!ELEMENT pathDefaults (allowFeatureInfo?, defaultColorScaleRange?, defaultPaletteName?, defaultNumColorBands?, logScaling?)>
<!ELEMENT variables (variable*)>
<!ELEMENT variable (defaultColorScaleRange?, defaultPaletteName?, defaultNumColorBands?, logScaling?)>
<!ATTLIST variable id CDATA #REQUIRED>
<!ELEMENT allowFeatureInfo (#PCDATA)>
<!ELEMENT defaultColorScaleRange (#PCDATA)>
<!ELEMENT defaultPaletteName (#PCDATA)>
<!ELEMENT defaultNumColorBands (#PCDATA)>
<!ELEMENT logScaling (#PCDATA)>
]>
to:
<!DOCTYPE wmsConfig SYSTEM "http://www.unidata.ucar.edu/schemas/thredds/dtd/ncwms/wmsConfig.dtd">