Okay it appears to have something to do with building the aggregations. On a clean start up, it went through every file and then stopped, at least for awhile. The problem is we have hundreds of thousands of files (yes this is correct two of our datasets alone are over 20.000 files), and catalina.out grows to be a very large size. I assume there must be a way to suppress writing this, but I don't know how. Up to these changes, our catlaina.out over even over a month from a "ls -l" was about 3400 or so , now in a few hours it is many (with the emphasis on many) orders of magnitude larger. -Roy On Feb 23, 2011, at 6:27 AM, Kyle Wilcox wrote: > I'm also seeing this in catalina.out > > ... > regexp .*\.nc$ on /data/ftp/upload/Shelf_Hypoxia/dal/roms/his_mch_052_0065.nc > match=true > regexp .*\.nc$ on /data/ftp/upload/Shelf_Hypoxia/dal/roms/his_mch_052_0066.nc > match=true > regexp .*\.nc$ on /data/ftp/upload/Shelf_Hypoxia/dal/roms/his_mch_052_0080.nc > match=true > ... > > > [minime@testbedapps ~]# java -version > java version "1.6.0_21" > Java(TM) SE Runtime Environment (build 1.6.0_21-b06) > Java HotSpot(TM) 64-Bit Server VM (build 17.0-b16, mixed mode) > > THREDDS Data Server Version 4.2.1 Build Date = 2010-12-01 20:28:24 Build > Name = 1 > > >> -----Original Message----- >> From: thredds-bounces@xxxxxxxxxxxxxxxx [mailto:thredds- >> bounces@xxxxxxxxxxxxxxxx] On Behalf Of John Caron >> Sent: Tuesday, February 22, 2011 6:31 PM >> Cc: THREDDS community >> Subject: Re: [thredds] Fwd: Release Announcement: CPU11_01 Java SE >> Critical Patch Update >> >> On 2/22/2011 4:01 PM, Roy Mendelssohn wrote: >>> We did this update. Do to some other problems, I noticed our >> catalina.out was huge. We got expressions like: >>> >>> regexp .*\.nc$ on regexp .*\.nc$ on >> /u00/satellite/cwtest2/aqua/modis/mercator/chlora/D1/MODSCW_P2009106_C3 >> _1755_1930_1935_GM05_closest_chlor >>> a.nc match=true >>> >>> that are filling up our catalina.out . No other changes were made. >> Even switching back to out old java does not seem to correct this. >>> >>> Any ideas of what is going on? >>> >>> -Roy >> >> any chance theres a classpath problem, eg a spurious netcdf.jar from an >> old version ? >> >> >> _______________________________________________ >> thredds mailing list >> thredds@xxxxxxxxxxxxxxxx >> For list information or to unsubscribe, visit: >> http://www.unidata.ucar.edu/mailing_lists/ > > _______________________________________________ > thredds mailing list > thredds@xxxxxxxxxxxxxxxx > For list information or to unsubscribe, visit: > http://www.unidata.ucar.edu/mailing_lists/ ********************** "The contents of this message do not reflect any position of the U.S. Government or NOAA." ********************** Roy Mendelssohn Supervisory Operations Research Analyst NOAA/NMFS Environmental Research Division Southwest Fisheries Science Center 1352 Lighthouse Avenue Pacific Grove, CA 93950-2097 e-mail: Roy.Mendelssohn@xxxxxxxx (Note new e-mail address) voice: (831)-648-9029 fax: (831)-648-8440 www: http://www.pfeg.noaa.gov/ "Old age and treachery will overcome youth and skill." "From those who have been given much, much will be expected"