Re: [thredds] Fwd: Release Announcement: CPU11_01 Java SE Critical Patch Update

Okay it appears to have something to do with building the aggregations. On a 
clean start up, it went through every file and then stopped, at least for 
awhile.  The problem is we have hundreds of thousands of files  (yes this is 
correct two of our datasets alone are over 20.000 files), and catalina.out 
grows to be a very large size.  I assume there  must be a way to suppress 
writing this, but I don't know how.  Up to these changes, our catlaina.out over 
even over a month from a "ls -l" was about 3400 or so , now in a few hours it 
is many (with the emphasis on many) orders of magnitude larger.

-Roy




On Feb 23, 2011, at 6:27 AM, Kyle Wilcox wrote:

> I'm also seeing this in catalina.out
> 
> ...
> regexp .*\.nc$ on /data/ftp/upload/Shelf_Hypoxia/dal/roms/his_mch_052_0065.nc 
> match=true
> regexp .*\.nc$ on /data/ftp/upload/Shelf_Hypoxia/dal/roms/his_mch_052_0066.nc 
> match=true
> regexp .*\.nc$ on /data/ftp/upload/Shelf_Hypoxia/dal/roms/his_mch_052_0080.nc 
> match=true
> ...
> 
> 
> [minime@testbedapps ~]# java -version
> java version "1.6.0_21"
> Java(TM) SE Runtime Environment (build 1.6.0_21-b06)
> Java HotSpot(TM) 64-Bit Server VM (build 17.0-b16, mixed mode)
> 
> THREDDS Data Server Version 4.2.1   Build Date = 2010-12-01 20:28:24   Build 
> Name = 1
> 
> 
>> -----Original Message-----
>> From: thredds-bounces@xxxxxxxxxxxxxxxx [mailto:thredds-
>> bounces@xxxxxxxxxxxxxxxx] On Behalf Of John Caron
>> Sent: Tuesday, February 22, 2011 6:31 PM
>> Cc: THREDDS community
>> Subject: Re: [thredds] Fwd: Release Announcement: CPU11_01 Java SE
>> Critical Patch Update
>> 
>> On 2/22/2011 4:01 PM, Roy Mendelssohn wrote:
>>> We did this update.  Do to some other problems, I noticed our
>> catalina.out was huge.  We got expressions like:
>>> 
>>> regexp .*\.nc$ on regexp .*\.nc$ on
>> /u00/satellite/cwtest2/aqua/modis/mercator/chlora/D1/MODSCW_P2009106_C3
>> _1755_1930_1935_GM05_closest_chlor
>>> a.nc match=true
>>> 
>>> that are filling up our catalina.out .  No other changes were made.
>> Even switching back to out old java does not seem to correct this.
>>> 
>>> Any ideas of what is going on?
>>> 
>>> -Roy
>> 
>> any chance theres a classpath problem, eg a spurious netcdf.jar from an
>> old version ?
>> 
>> 
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**********************
"The contents of this message do not reflect any position of the U.S. 
Government or NOAA."
**********************
Roy Mendelssohn
Supervisory Operations Research Analyst
NOAA/NMFS
Environmental Research Division
Southwest Fisheries Science Center
1352 Lighthouse Avenue
Pacific Grove, CA 93950-2097

e-mail: Roy.Mendelssohn@xxxxxxxx (Note new e-mail address)
voice: (831)-648-9029
fax: (831)-648-8440
www: http://www.pfeg.noaa.gov/

"Old age and treachery will overcome youth and skill."
"From those who have been given much, much will be expected"